Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cln3Q61124 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.82■□□□□ 0.6
Cln3Q61124 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.82■□□□□ 0.6
Cln3Q61124 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.82■□□□□ 0.6
Cln3Q61124 Gm27459-201ENSMUST00000184860 107 ntBASIC18.82■□□□□ 0.6
Cln3Q61124 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cln3Q61124 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cln3Q61124 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cln3Q61124 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cln3Q61124 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cln3Q61124 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cln3Q61124 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cln3Q61124 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cln3Q61124 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Cln3Q61124 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cln3Q61124 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cln3Q61124 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cln3Q61124 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cln3Q61124 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.81■□□□□ 0.6
Cln3Q61124 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cln3Q61124 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.81■□□□□ 0.6
Cln3Q61124 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Cln3Q61124 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cln3Q61124 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.81■□□□□ 0.6
Cln3Q61124 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cln3Q61124 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cln3Q61124 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cln3Q61124 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Cln3Q61124 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.8■□□□□ 0.6
Cln3Q61124 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cln3Q61124 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cln3Q61124 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.8■□□□□ 0.6
Cln3Q61124 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cln3Q61124 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cln3Q61124 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.8■□□□□ 0.6
Cln3Q61124 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.8■□□□□ 0.6
Cln3Q61124 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.8■□□□□ 0.6
Cln3Q61124 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cln3Q61124 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cln3Q61124 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cln3Q61124 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.8■□□□□ 0.6
Cln3Q61124 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cln3Q61124 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cln3Q61124 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cln3Q61124 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cln3Q61124 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cln3Q61124 Gm5864-201ENSMUST00000202263 970 ntBASIC18.79■□□□□ 0.6
Cln3Q61124 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cln3Q61124 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cln3Q61124 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.79■□□□□ 0.6
Cln3Q61124 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cln3Q61124 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cln3Q61124 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cln3Q61124 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cln3Q61124 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cln3Q61124 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cln3Q61124 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cln3Q61124 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cln3Q61124 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cln3Q61124 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cln3Q61124 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cln3Q61124 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cln3Q61124 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cln3Q61124 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cln3Q61124 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cln3Q61124 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Cln3Q61124 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.77■□□□□ 0.6
Cln3Q61124 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Cln3Q61124 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.77■□□□□ 0.6
Cln3Q61124 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.77■□□□□ 0.6
Cln3Q61124 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cln3Q61124 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cln3Q61124 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cln3Q61124 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cln3Q61124 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cln3Q61124 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Cln3Q61124 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cln3Q61124 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cln3Q61124 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cln3Q61124 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Cln3Q61124 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cln3Q61124 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Cln3Q61124 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cln3Q61124 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cln3Q61124 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cln3Q61124 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cln3Q61124 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cln3Q61124 Gm28659-201ENSMUST00000188013 759 ntBASIC18.76■□□□□ 0.59
Cln3Q61124 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cln3Q61124 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.76■□□□□ 0.59
Cln3Q61124 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Cln3Q61124 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cln3Q61124 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Cln3Q61124 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cln3Q61124 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cln3Q61124 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cln3Q61124 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cln3Q61124 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cln3Q61124 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cln3Q61124 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms