Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfaip3Q60769 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.12■□□□□ 0.17
Tnfaip3Q60769 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Tnfaip3Q60769 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfaip3Q60769 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Tnfaip3Q60769 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.12■□□□□ 0.17
Tnfaip3Q60769 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Tnfaip3Q60769 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfaip3Q60769 Gm45058-201ENSMUST00000205810 766 ntBASIC16.12■□□□□ 0.17
Tnfaip3Q60769 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.12■□□□□ 0.17
Tnfaip3Q60769 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfaip3Q60769 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfaip3Q60769 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.12■□□□□ 0.17
Tnfaip3Q60769 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfaip3Q60769 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
Tnfaip3Q60769 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfaip3Q60769 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Tnfaip3Q60769 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfaip3Q60769 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfaip3Q60769 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfaip3Q60769 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfaip3Q60769 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfaip3Q60769 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfaip3Q60769 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Tnfaip3Q60769 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfaip3Q60769 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfaip3Q60769 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfaip3Q60769 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfaip3Q60769 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.11■□□□□ 0.17
Tnfaip3Q60769 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfaip3Q60769 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfaip3Q60769 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfaip3Q60769 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.11■□□□□ 0.17
Tnfaip3Q60769 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.11■□□□□ 0.17
Tnfaip3Q60769 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfaip3Q60769 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.11■□□□□ 0.17
Tnfaip3Q60769 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfaip3Q60769 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfaip3Q60769 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Tnfaip3Q60769 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfaip3Q60769 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfaip3Q60769 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.11■□□□□ 0.17
Tnfaip3Q60769 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Tnfaip3Q60769 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Tnfaip3Q60769 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfaip3Q60769 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfaip3Q60769 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.11■□□□□ 0.17
Tnfaip3Q60769 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfaip3Q60769 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Tnfaip3Q60769 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfaip3Q60769 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfaip3Q60769 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfaip3Q60769 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfaip3Q60769 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfaip3Q60769 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfaip3Q60769 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Tnfaip3Q60769 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfaip3Q60769 Mir5130-201ENSMUST00000175160 84 ntBASIC16.1■□□□□ 0.17
Tnfaip3Q60769 Gm7977-201ENSMUST00000193787 748 ntBASIC16.1■□□□□ 0.17
Tnfaip3Q60769 Gm8969-201ENSMUST00000199694 526 ntBASIC16.1■□□□□ 0.17
Tnfaip3Q60769 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfaip3Q60769 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfaip3Q60769 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfaip3Q60769 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfaip3Q60769 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfaip3Q60769 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.1■□□□□ 0.17
Tnfaip3Q60769 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfaip3Q60769 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfaip3Q60769 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfaip3Q60769 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfaip3Q60769 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.1■□□□□ 0.17
Tnfaip3Q60769 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfaip3Q60769 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.09■□□□□ 0.17
Tnfaip3Q60769 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Tnfaip3Q60769 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.09■□□□□ 0.17
Tnfaip3Q60769 Gm16061-201ENSMUST00000122167 857 ntBASIC16.09■□□□□ 0.17
Tnfaip3Q60769 Gm13474-201ENSMUST00000122466 815 ntBASIC16.09■□□□□ 0.17
Tnfaip3Q60769 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Tnfaip3Q60769 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.09■□□□□ 0.17
Tnfaip3Q60769 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.09■□□□□ 0.17
Tnfaip3Q60769 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfaip3Q60769 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfaip3Q60769 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfaip3Q60769 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfaip3Q60769 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfaip3Q60769 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfaip3Q60769 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfaip3Q60769 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfaip3Q60769 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.09■□□□□ 0.17
Tnfaip3Q60769 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tnfaip3Q60769 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tnfaip3Q60769 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tnfaip3Q60769 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tnfaip3Q60769 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Tnfaip3Q60769 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.08■□□□□ 0.16
Tnfaip3Q60769 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfaip3Q60769 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfaip3Q60769 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Tnfaip3Q60769 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfaip3Q60769 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms