Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atp13a4Q5XF90 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Atp13a4Q5XF90 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atp13a4Q5XF90 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Atp13a4Q5XF90 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atp13a4Q5XF90 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.54■□□□□ 0.56
Atp13a4Q5XF90 Gm5417-201ENSMUST00000079706 384 ntBASIC18.54■□□□□ 0.56
Atp13a4Q5XF90 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atp13a4Q5XF90 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atp13a4Q5XF90 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atp13a4Q5XF90 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.54■□□□□ 0.56
Atp13a4Q5XF90 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atp13a4Q5XF90 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Atp13a4Q5XF90 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atp13a4Q5XF90 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atp13a4Q5XF90 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atp13a4Q5XF90 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.53■□□□□ 0.56
Atp13a4Q5XF90 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atp13a4Q5XF90 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atp13a4Q5XF90 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atp13a4Q5XF90 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atp13a4Q5XF90 Gm9731-201ENSMUST00000209480 747 ntBASIC18.53■□□□□ 0.56
Atp13a4Q5XF90 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atp13a4Q5XF90 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atp13a4Q5XF90 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atp13a4Q5XF90 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Atp13a4Q5XF90 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atp13a4Q5XF90 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Atp13a4Q5XF90 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atp13a4Q5XF90 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atp13a4Q5XF90 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atp13a4Q5XF90 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atp13a4Q5XF90 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.52■□□□□ 0.56
Atp13a4Q5XF90 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Atp13a4Q5XF90 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atp13a4Q5XF90 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Atp13a4Q5XF90 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atp13a4Q5XF90 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atp13a4Q5XF90 Gm37055-201ENSMUST00000191866 133 ntBASIC18.52■□□□□ 0.56
Atp13a4Q5XF90 Gm10252-201ENSMUST00000209541 832 ntBASIC18.52■□□□□ 0.56
Atp13a4Q5XF90 Gm7791-201ENSMUST00000219066 539 ntBASIC18.52■□□□□ 0.56
Atp13a4Q5XF90 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atp13a4Q5XF90 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atp13a4Q5XF90 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atp13a4Q5XF90 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Atp13a4Q5XF90 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.55
Atp13a4Q5XF90 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Atp13a4Q5XF90 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Atp13a4Q5XF90 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Atp13a4Q5XF90 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Atp13a4Q5XF90 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atp13a4Q5XF90 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atp13a4Q5XF90 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atp13a4Q5XF90 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Atp13a4Q5XF90 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atp13a4Q5XF90 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atp13a4Q5XF90 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.51■□□□□ 0.55
Atp13a4Q5XF90 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.51■□□□□ 0.55
Atp13a4Q5XF90 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.51■□□□□ 0.55
Atp13a4Q5XF90 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atp13a4Q5XF90 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atp13a4Q5XF90 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Atp13a4Q5XF90 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Atp13a4Q5XF90 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atp13a4Q5XF90 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atp13a4Q5XF90 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atp13a4Q5XF90 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atp13a4Q5XF90 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atp13a4Q5XF90 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.51■□□□□ 0.55
Atp13a4Q5XF90 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atp13a4Q5XF90 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atp13a4Q5XF90 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atp13a4Q5XF90 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atp13a4Q5XF90 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atp13a4Q5XF90 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atp13a4Q5XF90 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atp13a4Q5XF90 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atp13a4Q5XF90 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atp13a4Q5XF90 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atp13a4Q5XF90 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.5■□□□□ 0.55
Atp13a4Q5XF90 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Atp13a4Q5XF90 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.5■□□□□ 0.55
Atp13a4Q5XF90 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atp13a4Q5XF90 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Atp13a4Q5XF90 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Atp13a4Q5XF90 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atp13a4Q5XF90 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.5■□□□□ 0.55
Atp13a4Q5XF90 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.5■□□□□ 0.55
Atp13a4Q5XF90 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.5■□□□□ 0.55
Atp13a4Q5XF90 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.49■□□□□ 0.55
Atp13a4Q5XF90 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atp13a4Q5XF90 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atp13a4Q5XF90 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Atp13a4Q5XF90 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
Atp13a4Q5XF90 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atp13a4Q5XF90 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atp13a4Q5XF90 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.49■□□□□ 0.55
Atp13a4Q5XF90 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Atp13a4Q5XF90 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atp13a4Q5XF90 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms