Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ubr3Q5U430 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
Ubr3Q5U430 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Ubr3Q5U430 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ubr3Q5U430 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ubr3Q5U430 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ubr3Q5U430 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC20.85■□□□□ 0.93
Ubr3Q5U430 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
Ubr3Q5U430 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ubr3Q5U430 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Ubr3Q5U430 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.85■□□□□ 0.93
Ubr3Q5U430 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Ubr3Q5U430 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ubr3Q5U430 Gm25990-201ENSMUST00000102440 86 ntBASIC20.84■□□□□ 0.93
Ubr3Q5U430 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Ubr3Q5U430 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC20.84■□□□□ 0.93
Ubr3Q5U430 AC154621.1-201ENSMUST00000226155 1119 ntBASIC20.84■□□□□ 0.93
Ubr3Q5U430 Psmb5-202ENSMUST00000227257 622 ntBASIC20.84■□□□□ 0.93
Ubr3Q5U430 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ubr3Q5U430 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC20.84■□□□□ 0.93
Ubr3Q5U430 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ubr3Q5U430 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ubr3Q5U430 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Ubr3Q5U430 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ubr3Q5U430 Zfp264-201ENSMUST00000208656 1563 ntBASIC20.84■□□□□ 0.93
Ubr3Q5U430 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
Ubr3Q5U430 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC20.84■□□□□ 0.93
Ubr3Q5U430 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ubr3Q5U430 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ubr3Q5U430 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ubr3Q5U430 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ubr3Q5U430 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ubr3Q5U430 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ubr3Q5U430 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Ubr3Q5U430 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ubr3Q5U430 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ubr3Q5U430 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Ubr3Q5U430 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Ubr3Q5U430 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC20.83■□□□□ 0.92
Ubr3Q5U430 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Ubr3Q5U430 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ubr3Q5U430 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Ubr3Q5U430 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ubr3Q5U430 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ubr3Q5U430 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ubr3Q5U430 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ubr3Q5U430 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
Ubr3Q5U430 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
Ubr3Q5U430 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ubr3Q5U430 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Ubr3Q5U430 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC20.82■□□□□ 0.92
Ubr3Q5U430 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ubr3Q5U430 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Ubr3Q5U430 Gm43575-201ENSMUST00000196420 516 ntBASIC20.82■□□□□ 0.92
Ubr3Q5U430 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ubr3Q5U430 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ubr3Q5U430 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ubr3Q5U430 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ubr3Q5U430 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ubr3Q5U430 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ubr3Q5U430 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ubr3Q5U430 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ubr3Q5U430 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ubr3Q5U430 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC20.81■□□□□ 0.92
Ubr3Q5U430 Gm44430-201ENSMUST00000203376 995 ntBASIC20.81■□□□□ 0.92
Ubr3Q5U430 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Ubr3Q5U430 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ubr3Q5U430 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ubr3Q5U430 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Ubr3Q5U430 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ubr3Q5U430 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ubr3Q5U430 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.81■□□□□ 0.92
Ubr3Q5U430 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Ubr3Q5U430 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ubr3Q5U430 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC20.81■□□□□ 0.92
Ubr3Q5U430 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC20.81■□□□□ 0.92
Ubr3Q5U430 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ubr3Q5U430 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ubr3Q5U430 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ubr3Q5U430 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Ubr3Q5U430 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC20.8■□□□□ 0.92
Ubr3Q5U430 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ubr3Q5U430 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Ubr3Q5U430 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ubr3Q5U430 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ubr3Q5U430 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ubr3Q5U430 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC20.79■□□□□ 0.92
Ubr3Q5U430 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC20.79■□□□□ 0.92
Ubr3Q5U430 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ubr3Q5U430 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
Ubr3Q5U430 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ubr3Q5U430 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ubr3Q5U430 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Ubr3Q5U430 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ubr3Q5U430 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ubr3Q5U430 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ubr3Q5U430 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ubr3Q5U430 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ubr3Q5U430 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ubr3Q5U430 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms