Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-4Q5R1I0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav6d-4Q5R1I0 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav6d-4Q5R1I0 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-4Q5R1I0 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-4Q5R1I0 Gm8969-201ENSMUST00000199694 526 ntBASIC14.43□□□□□ -0.1
Trav6d-4Q5R1I0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav6d-4Q5R1I0 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav6d-4Q5R1I0 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-4Q5R1I0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.43□□□□□ -0.1
Trav6d-4Q5R1I0 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-4Q5R1I0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav6d-4Q5R1I0 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-4Q5R1I0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-4Q5R1I0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-4Q5R1I0 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav6d-4Q5R1I0 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav6d-4Q5R1I0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6d-4Q5R1I0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Trav6d-4Q5R1I0 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Trav6d-4Q5R1I0 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.42□□□□□ -0.1
Trav6d-4Q5R1I0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6d-4Q5R1I0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Trav6d-4Q5R1I0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6d-4Q5R1I0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.42□□□□□ -0.1
Trav6d-4Q5R1I0 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav6d-4Q5R1I0 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6d-4Q5R1I0 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.42□□□□□ -0.1
Trav6d-4Q5R1I0 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6d-4Q5R1I0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6d-4Q5R1I0 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6d-4Q5R1I0 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trav6d-4Q5R1I0 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6d-4Q5R1I0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6d-4Q5R1I0 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6d-4Q5R1I0 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.41□□□□□ -0.1
Trav6d-4Q5R1I0 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6d-4Q5R1I0 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trav6d-4Q5R1I0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.41□□□□□ -0.1
Trav6d-4Q5R1I0 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.41□□□□□ -0.1
Trav6d-4Q5R1I0 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6d-4Q5R1I0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6d-4Q5R1I0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6d-4Q5R1I0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.41□□□□□ -0.1
Trav6d-4Q5R1I0 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6d-4Q5R1I0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6d-4Q5R1I0 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6d-4Q5R1I0 Gm7370-201ENSMUST00000219471 767 ntBASIC14.41□□□□□ -0.1
Trav6d-4Q5R1I0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6d-4Q5R1I0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trav6d-4Q5R1I0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6d-4Q5R1I0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav6d-4Q5R1I0 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6d-4Q5R1I0 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6d-4Q5R1I0 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav6d-4Q5R1I0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6d-4Q5R1I0 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6d-4Q5R1I0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6d-4Q5R1I0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Trav6d-4Q5R1I0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6d-4Q5R1I0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav6d-4Q5R1I0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.4□□□□□ -0.1
Trav6d-4Q5R1I0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6d-4Q5R1I0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav6d-4Q5R1I0 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6d-4Q5R1I0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
Trav6d-4Q5R1I0 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.4□□□□□ -0.1
Trav6d-4Q5R1I0 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6d-4Q5R1I0 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6d-4Q5R1I0 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trav6d-4Q5R1I0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6d-4Q5R1I0 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6d-4Q5R1I0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6d-4Q5R1I0 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.4□□□□□ -0.1
Trav6d-4Q5R1I0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav6d-4Q5R1I0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav6d-4Q5R1I0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6d-4Q5R1I0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6d-4Q5R1I0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-4Q5R1I0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-4Q5R1I0 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav6d-4Q5R1I0 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.39□□□□□ -0.11
Trav6d-4Q5R1I0 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav6d-4Q5R1I0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav6d-4Q5R1I0 Gm22697-201ENSMUST00000175194 63 ntBASIC14.39□□□□□ -0.11
Trav6d-4Q5R1I0 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.39□□□□□ -0.11
Trav6d-4Q5R1I0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-4Q5R1I0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-4Q5R1I0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-4Q5R1I0 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-4Q5R1I0 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-4Q5R1I0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-4Q5R1I0 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.39□□□□□ -0.11
Trav6d-4Q5R1I0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-4Q5R1I0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6d-4Q5R1I0 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6d-4Q5R1I0 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6d-4Q5R1I0 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trav6d-4Q5R1I0 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6d-4Q5R1I0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms