Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-1Q5R1H8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-1Q5R1H8 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav8d-1Q5R1H8 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav8d-1Q5R1H8 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.09□□□□□ -0.15
Trav8d-1Q5R1H8 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav8d-1Q5R1H8 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Trav8d-1Q5R1H8 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav8d-1Q5R1H8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav8d-1Q5R1H8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav8d-1Q5R1H8 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav8d-1Q5R1H8 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Trav8d-1Q5R1H8 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav8d-1Q5R1H8 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Trav8d-1Q5R1H8 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav8d-1Q5R1H8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.09□□□□□ -0.15
Trav8d-1Q5R1H8 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav8d-1Q5R1H8 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.09□□□□□ -0.15
Trav8d-1Q5R1H8 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav8d-1Q5R1H8 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav8d-1Q5R1H8 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav8d-1Q5R1H8 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav8d-1Q5R1H8 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav8d-1Q5R1H8 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav8d-1Q5R1H8 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Trav8d-1Q5R1H8 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav8d-1Q5R1H8 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav8d-1Q5R1H8 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav8d-1Q5R1H8 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav8d-1Q5R1H8 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav8d-1Q5R1H8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav8d-1Q5R1H8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.08□□□□□ -0.16
Trav8d-1Q5R1H8 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trav8d-1Q5R1H8 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trav8d-1Q5R1H8 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav8d-1Q5R1H8 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav8d-1Q5R1H8 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trav8d-1Q5R1H8 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav8d-1Q5R1H8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trav8d-1Q5R1H8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav8d-1Q5R1H8 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav8d-1Q5R1H8 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav8d-1Q5R1H8 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav8d-1Q5R1H8 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav8d-1Q5R1H8 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav8d-1Q5R1H8 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav8d-1Q5R1H8 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav8d-1Q5R1H8 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
Trav8d-1Q5R1H8 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav8d-1Q5R1H8 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav8d-1Q5R1H8 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav8d-1Q5R1H8 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8d-1Q5R1H8 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav8d-1Q5R1H8 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav8d-1Q5R1H8 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8d-1Q5R1H8 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8d-1Q5R1H8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav8d-1Q5R1H8 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8d-1Q5R1H8 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8d-1Q5R1H8 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8d-1Q5R1H8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav8d-1Q5R1H8 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav8d-1Q5R1H8 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8d-1Q5R1H8 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8d-1Q5R1H8 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Trav8d-1Q5R1H8 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC14.07□□□□□ -0.16
Trav8d-1Q5R1H8 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC14.07□□□□□ -0.16
Trav8d-1Q5R1H8 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8d-1Q5R1H8 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8d-1Q5R1H8 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav8d-1Q5R1H8 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8d-1Q5R1H8 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8d-1Q5R1H8 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Trav8d-1Q5R1H8 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav8d-1Q5R1H8 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8d-1Q5R1H8 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8d-1Q5R1H8 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.07□□□□□ -0.16
Trav8d-1Q5R1H8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8d-1Q5R1H8 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8d-1Q5R1H8 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8d-1Q5R1H8 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8d-1Q5R1H8 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8d-1Q5R1H8 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8d-1Q5R1H8 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8d-1Q5R1H8 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8d-1Q5R1H8 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav8d-1Q5R1H8 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8d-1Q5R1H8 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav8d-1Q5R1H8 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8d-1Q5R1H8 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8d-1Q5R1H8 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8d-1Q5R1H8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav8d-1Q5R1H8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav8d-1Q5R1H8 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8d-1Q5R1H8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Trav8d-1Q5R1H8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8d-1Q5R1H8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8d-1Q5R1H8 Gm3807-201ENSMUST00000193520 1168 ntBASIC14.06□□□□□ -0.16
Trav8d-1Q5R1H8 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav8d-1Q5R1H8 AC160393.1-201ENSMUST00000218378 1279 ntBASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms