Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Rnf20Q5DTM8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf20Q5DTM8 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Rnf20Q5DTM8 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf20Q5DTM8 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf20Q5DTM8 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf20Q5DTM8 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf20Q5DTM8 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf20Q5DTM8 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.42■□□□□ 0.86
Rnf20Q5DTM8 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf20Q5DTM8 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf20Q5DTM8 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf20Q5DTM8 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf20Q5DTM8 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf20Q5DTM8 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf20Q5DTM8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf20Q5DTM8 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf20Q5DTM8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf20Q5DTM8 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf20Q5DTM8 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Rnf20Q5DTM8 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Rnf20Q5DTM8 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf20Q5DTM8 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.41■□□□□ 0.86
Rnf20Q5DTM8 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf20Q5DTM8 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf20Q5DTM8 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Rnf20Q5DTM8 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf20Q5DTM8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Rnf20Q5DTM8 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf20Q5DTM8 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.41■□□□□ 0.86
Rnf20Q5DTM8 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf20Q5DTM8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf20Q5DTM8 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf20Q5DTM8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Rnf20Q5DTM8 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Rnf20Q5DTM8 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Rnf20Q5DTM8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Rnf20Q5DTM8 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf20Q5DTM8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf20Q5DTM8 Gm22240-201ENSMUST00000175225 82 ntBASIC20.4■□□□□ 0.86
Rnf20Q5DTM8 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf20Q5DTM8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf20Q5DTM8 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf20Q5DTM8 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf20Q5DTM8 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.4■□□□□ 0.86
Rnf20Q5DTM8 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf20Q5DTM8 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.4■□□□□ 0.86
Rnf20Q5DTM8 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Rnf20Q5DTM8 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf20Q5DTM8 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Rnf20Q5DTM8 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf20Q5DTM8 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rnf20Q5DTM8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rnf20Q5DTM8 Gm16499-203ENSMUST00000204633 2177 ntBASIC20.39■□□□□ 0.86
Rnf20Q5DTM8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Rnf20Q5DTM8 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Rnf20Q5DTM8 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Rnf20Q5DTM8 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf20Q5DTM8 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf20Q5DTM8 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf20Q5DTM8 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.39■□□□□ 0.85
Rnf20Q5DTM8 Gm17661-201ENSMUST00000170317 270 ntBASIC20.39■□□□□ 0.85
Rnf20Q5DTM8 Gm27011-201ENSMUST00000182352 972 ntBASIC20.39■□□□□ 0.85
Rnf20Q5DTM8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.39■□□□□ 0.85
Rnf20Q5DTM8 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf20Q5DTM8 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf20Q5DTM8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf20Q5DTM8 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf20Q5DTM8 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf20Q5DTM8 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Rnf20Q5DTM8 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf20Q5DTM8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf20Q5DTM8 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf20Q5DTM8 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf20Q5DTM8 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf20Q5DTM8 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf20Q5DTM8 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf20Q5DTM8 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.38■□□□□ 0.85
Rnf20Q5DTM8 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf20Q5DTM8 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf20Q5DTM8 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf20Q5DTM8 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf20Q5DTM8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Rnf20Q5DTM8 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf20Q5DTM8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf20Q5DTM8 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf20Q5DTM8 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.37■□□□□ 0.85
Rnf20Q5DTM8 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf20Q5DTM8 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf20Q5DTM8 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.37■□□□□ 0.85
Rnf20Q5DTM8 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Rnf20Q5DTM8 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Rnf20Q5DTM8 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Rnf20Q5DTM8 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Rnf20Q5DTM8 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf20Q5DTM8 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf20Q5DTM8 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.37■□□□□ 0.85
Rnf20Q5DTM8 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf20Q5DTM8 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf20Q5DTM8 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms