Protein–RNA interactions for Protein: Q3V3V9

Carmil2, Capping protein, Arp2/3 and myosin-I linker protein 2, mousemouse

Predictions only

Length 1,296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil2Q3V3V9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Carmil2Q3V3V9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Carmil2Q3V3V9 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Carmil2Q3V3V9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Carmil2Q3V3V9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Carmil2Q3V3V9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Carmil2Q3V3V9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Carmil2Q3V3V9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Carmil2Q3V3V9 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Carmil2Q3V3V9 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.16■□□□□ 0.66
Carmil2Q3V3V9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Carmil2Q3V3V9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Carmil2Q3V3V9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Carmil2Q3V3V9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Carmil2Q3V3V9 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.16■□□□□ 0.66
Carmil2Q3V3V9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Carmil2Q3V3V9 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Carmil2Q3V3V9 Gm17661-201ENSMUST00000170317 270 ntBASIC19.16■□□□□ 0.66
Carmil2Q3V3V9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Carmil2Q3V3V9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Carmil2Q3V3V9 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Carmil2Q3V3V9 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Carmil2Q3V3V9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Carmil2Q3V3V9 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.16■□□□□ 0.66
Carmil2Q3V3V9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Carmil2Q3V3V9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Carmil2Q3V3V9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Carmil2Q3V3V9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Carmil2Q3V3V9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Carmil2Q3V3V9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Carmil2Q3V3V9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Carmil2Q3V3V9 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Carmil2Q3V3V9 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Carmil2Q3V3V9 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Carmil2Q3V3V9 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Carmil2Q3V3V9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.15■□□□□ 0.66
Carmil2Q3V3V9 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Carmil2Q3V3V9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.15■□□□□ 0.66
Carmil2Q3V3V9 Gm45058-201ENSMUST00000205810 766 ntBASIC19.15■□□□□ 0.66
Carmil2Q3V3V9 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Carmil2Q3V3V9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Carmil2Q3V3V9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Carmil2Q3V3V9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Carmil2Q3V3V9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Carmil2Q3V3V9 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.15■□□□□ 0.66
Carmil2Q3V3V9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Carmil2Q3V3V9 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Carmil2Q3V3V9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Carmil2Q3V3V9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Carmil2Q3V3V9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Carmil2Q3V3V9 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Carmil2Q3V3V9 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Carmil2Q3V3V9 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Carmil2Q3V3V9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Carmil2Q3V3V9 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Carmil2Q3V3V9 Gm7153-201ENSMUST00000117092 455 ntBASIC19.14■□□□□ 0.65
Carmil2Q3V3V9 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Carmil2Q3V3V9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.14■□□□□ 0.65
Carmil2Q3V3V9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Carmil2Q3V3V9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Carmil2Q3V3V9 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Carmil2Q3V3V9 Gm28033-201ENSMUST00000184224 96 ntBASIC19.14■□□□□ 0.65
Carmil2Q3V3V9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.14■□□□□ 0.65
Carmil2Q3V3V9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Carmil2Q3V3V9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Carmil2Q3V3V9 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.14■□□□□ 0.65
Carmil2Q3V3V9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Carmil2Q3V3V9 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Carmil2Q3V3V9 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.13■□□□□ 0.65
Carmil2Q3V3V9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Carmil2Q3V3V9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Carmil2Q3V3V9 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Carmil2Q3V3V9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Carmil2Q3V3V9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Carmil2Q3V3V9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
Carmil2Q3V3V9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Carmil2Q3V3V9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.13■□□□□ 0.65
Carmil2Q3V3V9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Carmil2Q3V3V9 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Carmil2Q3V3V9 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Carmil2Q3V3V9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Carmil2Q3V3V9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Carmil2Q3V3V9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.13■□□□□ 0.65
Carmil2Q3V3V9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Carmil2Q3V3V9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Carmil2Q3V3V9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Carmil2Q3V3V9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Carmil2Q3V3V9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Carmil2Q3V3V9 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Carmil2Q3V3V9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Carmil2Q3V3V9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Carmil2Q3V3V9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Carmil2Q3V3V9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Carmil2Q3V3V9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Carmil2Q3V3V9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Carmil2Q3V3V9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Carmil2Q3V3V9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
Carmil2Q3V3V9 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Carmil2Q3V3V9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Carmil2Q3V3V9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms