Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ckap2Q3V1H1 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ckap2Q3V1H1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ckap2Q3V1H1 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.69■□□□□ 0.74
Ckap2Q3V1H1 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.69■□□□□ 0.74
Ckap2Q3V1H1 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ckap2Q3V1H1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ckap2Q3V1H1 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ckap2Q3V1H1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ckap2Q3V1H1 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ckap2Q3V1H1 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.69■□□□□ 0.74
Ckap2Q3V1H1 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ckap2Q3V1H1 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ckap2Q3V1H1 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ckap2Q3V1H1 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Ckap2Q3V1H1 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ckap2Q3V1H1 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ckap2Q3V1H1 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ckap2Q3V1H1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ckap2Q3V1H1 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ckap2Q3V1H1 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ckap2Q3V1H1 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.68■□□□□ 0.74
Ckap2Q3V1H1 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Ckap2Q3V1H1 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ckap2Q3V1H1 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.68■□□□□ 0.74
Ckap2Q3V1H1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ckap2Q3V1H1 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ckap2Q3V1H1 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ckap2Q3V1H1 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.68■□□□□ 0.74
Ckap2Q3V1H1 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ckap2Q3V1H1 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ckap2Q3V1H1 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.68■□□□□ 0.74
Ckap2Q3V1H1 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ckap2Q3V1H1 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ckap2Q3V1H1 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ckap2Q3V1H1 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ckap2Q3V1H1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ckap2Q3V1H1 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ckap2Q3V1H1 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Ckap2Q3V1H1 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ckap2Q3V1H1 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ckap2Q3V1H1 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ckap2Q3V1H1 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ckap2Q3V1H1 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ckap2Q3V1H1 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ckap2Q3V1H1 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ckap2Q3V1H1 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ckap2Q3V1H1 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ckap2Q3V1H1 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.66■□□□□ 0.74
Ckap2Q3V1H1 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.66■□□□□ 0.74
Ckap2Q3V1H1 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ckap2Q3V1H1 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.66■□□□□ 0.74
Ckap2Q3V1H1 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ckap2Q3V1H1 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ckap2Q3V1H1 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Ckap2Q3V1H1 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ckap2Q3V1H1 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Ckap2Q3V1H1 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ckap2Q3V1H1 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ckap2Q3V1H1 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ckap2Q3V1H1 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ckap2Q3V1H1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ckap2Q3V1H1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Ckap2Q3V1H1 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Ckap2Q3V1H1 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ckap2Q3V1H1 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.65■□□□□ 0.74
Ckap2Q3V1H1 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.65■□□□□ 0.74
Ckap2Q3V1H1 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Ckap2Q3V1H1 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Ckap2Q3V1H1 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.65■□□□□ 0.74
Ckap2Q3V1H1 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Ckap2Q3V1H1 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ckap2Q3V1H1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.65■□□□□ 0.74
Ckap2Q3V1H1 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ckap2Q3V1H1 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ckap2Q3V1H1 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ckap2Q3V1H1 Gm15565-201ENSMUST00000118890 427 ntBASIC19.64■□□□□ 0.73
Ckap2Q3V1H1 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ckap2Q3V1H1 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.64■□□□□ 0.73
Ckap2Q3V1H1 Gm43799-201ENSMUST00000201845 579 ntBASIC19.64■□□□□ 0.73
Ckap2Q3V1H1 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ckap2Q3V1H1 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ckap2Q3V1H1 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Ckap2Q3V1H1 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.64■□□□□ 0.73
Ckap2Q3V1H1 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ckap2Q3V1H1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ckap2Q3V1H1 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Ckap2Q3V1H1 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
Ckap2Q3V1H1 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ckap2Q3V1H1 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Ckap2Q3V1H1 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ckap2Q3V1H1 Mir6982-201ENSMUST00000184354 68 ntBASIC19.63■□□□□ 0.73
Ckap2Q3V1H1 Gm7370-201ENSMUST00000219471 767 ntBASIC19.63■□□□□ 0.73
Ckap2Q3V1H1 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ckap2Q3V1H1 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ckap2Q3V1H1 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.63■□□□□ 0.73
Ckap2Q3V1H1 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ckap2Q3V1H1 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ckap2Q3V1H1 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.62■□□□□ 0.73
Ckap2Q3V1H1 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms