Protein–RNA interactions for Protein: Q3V038

Ttc9, Tetratricopeptide repeat protein 9A, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc9Q3V038 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ttc9Q3V038 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ttc9Q3V038 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ttc9Q3V038 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ttc9Q3V038 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ttc9Q3V038 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ttc9Q3V038 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
Ttc9Q3V038 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ttc9Q3V038 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.31■□□□□ 0.52
Ttc9Q3V038 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ttc9Q3V038 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ttc9Q3V038 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ttc9Q3V038 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.31■□□□□ 0.52
Ttc9Q3V038 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.31■□□□□ 0.52
Ttc9Q3V038 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Ttc9Q3V038 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ttc9Q3V038 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.31■□□□□ 0.52
Ttc9Q3V038 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ttc9Q3V038 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Ttc9Q3V038 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
Ttc9Q3V038 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ttc9Q3V038 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ttc9Q3V038 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Ttc9Q3V038 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.31■□□□□ 0.52
Ttc9Q3V038 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Ttc9Q3V038 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.31■□□□□ 0.52
Ttc9Q3V038 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ttc9Q3V038 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ttc9Q3V038 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ttc9Q3V038 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ttc9Q3V038 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ttc9Q3V038 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ttc9Q3V038 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.3■□□□□ 0.52
Ttc9Q3V038 Gm2274-201ENSMUST00000184539 609 ntBASIC18.3■□□□□ 0.52
Ttc9Q3V038 Gm17807-201ENSMUST00000186869 298 ntBASIC18.3■□□□□ 0.52
Ttc9Q3V038 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ttc9Q3V038 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Ttc9Q3V038 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ttc9Q3V038 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ttc9Q3V038 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ttc9Q3V038 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ttc9Q3V038 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ttc9Q3V038 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Ttc9Q3V038 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Ttc9Q3V038 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ttc9Q3V038 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ttc9Q3V038 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.29■□□□□ 0.52
Ttc9Q3V038 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Ttc9Q3V038 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ttc9Q3V038 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ttc9Q3V038 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
Ttc9Q3V038 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ttc9Q3V038 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ttc9Q3V038 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ttc9Q3V038 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ttc9Q3V038 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ttc9Q3V038 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ttc9Q3V038 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ttc9Q3V038 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ttc9Q3V038 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.28■□□□□ 0.52
Ttc9Q3V038 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.28■□□□□ 0.52
Ttc9Q3V038 Gm18669-201ENSMUST00000216049 778 ntBASIC18.28■□□□□ 0.52
Ttc9Q3V038 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ttc9Q3V038 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ttc9Q3V038 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ttc9Q3V038 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.28■□□□□ 0.52
Ttc9Q3V038 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Ttc9Q3V038 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Ttc9Q3V038 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ttc9Q3V038 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Ttc9Q3V038 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ttc9Q3V038 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.28■□□□□ 0.52
Ttc9Q3V038 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Ttc9Q3V038 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ttc9Q3V038 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ttc9Q3V038 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Ttc9Q3V038 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.27■□□□□ 0.52
Ttc9Q3V038 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Ttc9Q3V038 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ttc9Q3V038 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ttc9Q3V038 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ttc9Q3V038 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ttc9Q3V038 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ttc9Q3V038 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ttc9Q3V038 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ttc9Q3V038 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ttc9Q3V038 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ttc9Q3V038 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ttc9Q3V038 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Ttc9Q3V038 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.27■□□□□ 0.51
Ttc9Q3V038 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ttc9Q3V038 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ttc9Q3V038 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ttc9Q3V038 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ttc9Q3V038 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ttc9Q3V038 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ttc9Q3V038 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.26■□□□□ 0.51
Ttc9Q3V038 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ttc9Q3V038 Gm6443-201ENSMUST00000203599 874 ntBASIC18.26■□□□□ 0.51
Ttc9Q3V038 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms