Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Fam196aQ3USH1 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.18■□□□□ 0.34
Fam196aQ3USH1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Fam196aQ3USH1 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Fam196aQ3USH1 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.18■□□□□ 0.34
Fam196aQ3USH1 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.18■□□□□ 0.34
Fam196aQ3USH1 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Fam196aQ3USH1 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.18■□□□□ 0.34
Fam196aQ3USH1 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.18■□□□□ 0.34
Fam196aQ3USH1 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Fam196aQ3USH1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Fam196aQ3USH1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Fam196aQ3USH1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Fam196aQ3USH1 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Fam196aQ3USH1 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Fam196aQ3USH1 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Fam196aQ3USH1 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Fam196aQ3USH1 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Fam196aQ3USH1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Fam196aQ3USH1 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Fam196aQ3USH1 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Fam196aQ3USH1 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Fam196aQ3USH1 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Fam196aQ3USH1 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.17■□□□□ 0.34
Fam196aQ3USH1 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.17■□□□□ 0.34
Fam196aQ3USH1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Fam196aQ3USH1 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Fam196aQ3USH1 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.17■□□□□ 0.34
Fam196aQ3USH1 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Fam196aQ3USH1 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Fam196aQ3USH1 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Fam196aQ3USH1 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Fam196aQ3USH1 Gm24513-201ENSMUST00000174964 138 ntBASIC17.17■□□□□ 0.34
Fam196aQ3USH1 Gm27397-201ENSMUST00000184997 107 ntBASIC17.17■□□□□ 0.34
Fam196aQ3USH1 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Fam196aQ3USH1 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.17■□□□□ 0.34
Fam196aQ3USH1 Psmb5-202ENSMUST00000227257 622 ntBASIC17.17■□□□□ 0.34
Fam196aQ3USH1 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Fam196aQ3USH1 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Fam196aQ3USH1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Fam196aQ3USH1 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Fam196aQ3USH1 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Fam196aQ3USH1 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.17■□□□□ 0.34
Fam196aQ3USH1 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.17■□□□□ 0.34
Fam196aQ3USH1 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Fam196aQ3USH1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Fam196aQ3USH1 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Fam196aQ3USH1 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Fam196aQ3USH1 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Fam196aQ3USH1 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Fam196aQ3USH1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Fam196aQ3USH1 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Fam196aQ3USH1 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Fam196aQ3USH1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Fam196aQ3USH1 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.16■□□□□ 0.34
Fam196aQ3USH1 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Fam196aQ3USH1 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Fam196aQ3USH1 Gm12260-201ENSMUST00000122447 411 ntBASIC17.16■□□□□ 0.34
Fam196aQ3USH1 Gm27867-201ENSMUST00000184778 125 ntBASIC17.16■□□□□ 0.34
Fam196aQ3USH1 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.16■□□□□ 0.34
Fam196aQ3USH1 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.16■□□□□ 0.34
Fam196aQ3USH1 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Fam196aQ3USH1 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Fam196aQ3USH1 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Fam196aQ3USH1 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Fam196aQ3USH1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Fam196aQ3USH1 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Fam196aQ3USH1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Fam196aQ3USH1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.16■□□□□ 0.34
Fam196aQ3USH1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Fam196aQ3USH1 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.16■□□□□ 0.34
Fam196aQ3USH1 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Fam196aQ3USH1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Fam196aQ3USH1 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fam196aQ3USH1 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fam196aQ3USH1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fam196aQ3USH1 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Fam196aQ3USH1 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fam196aQ3USH1 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.15■□□□□ 0.34
Fam196aQ3USH1 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fam196aQ3USH1 Gm13312-201ENSMUST00000119631 718 ntBASIC17.15■□□□□ 0.34
Fam196aQ3USH1 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.15■□□□□ 0.34
Fam196aQ3USH1 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.15■□□□□ 0.34
Fam196aQ3USH1 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fam196aQ3USH1 Auts2-212ENSMUST00000178555 309 ntBASIC17.15■□□□□ 0.34
Fam196aQ3USH1 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Fam196aQ3USH1 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fam196aQ3USH1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fam196aQ3USH1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Fam196aQ3USH1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fam196aQ3USH1 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fam196aQ3USH1 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Fam196aQ3USH1 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Fam196aQ3USH1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fam196aQ3USH1 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Fam196aQ3USH1 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Fam196aQ3USH1 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.14■□□□□ 0.33
Fam196aQ3USH1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Fam196aQ3USH1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Fam196aQ3USH1 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms