Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smcr8Q3UMB5 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.44■□□□□ 0.54
Smcr8Q3UMB5 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Smcr8Q3UMB5 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Smcr8Q3UMB5 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Smcr8Q3UMB5 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Smcr8Q3UMB5 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smcr8Q3UMB5 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Smcr8Q3UMB5 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smcr8Q3UMB5 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.44■□□□□ 0.54
Smcr8Q3UMB5 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smcr8Q3UMB5 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smcr8Q3UMB5 Gm6345-202ENSMUST00000180900 204 ntBASIC18.44■□□□□ 0.54
Smcr8Q3UMB5 Gm7370-201ENSMUST00000219471 767 ntBASIC18.44■□□□□ 0.54
Smcr8Q3UMB5 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Smcr8Q3UMB5 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smcr8Q3UMB5 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smcr8Q3UMB5 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Smcr8Q3UMB5 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smcr8Q3UMB5 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Smcr8Q3UMB5 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smcr8Q3UMB5 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smcr8Q3UMB5 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smcr8Q3UMB5 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smcr8Q3UMB5 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smcr8Q3UMB5 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Smcr8Q3UMB5 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smcr8Q3UMB5 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smcr8Q3UMB5 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Smcr8Q3UMB5 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Smcr8Q3UMB5 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.43■□□□□ 0.54
Smcr8Q3UMB5 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.43■□□□□ 0.54
Smcr8Q3UMB5 Il3ra-202ENSMUST00000223589 738 ntBASIC18.43■□□□□ 0.54
Smcr8Q3UMB5 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.43■□□□□ 0.54
Smcr8Q3UMB5 Gm10819-201ENSMUST00000099988 561 ntBASIC18.43■□□□□ 0.54
Smcr8Q3UMB5 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smcr8Q3UMB5 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Smcr8Q3UMB5 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Smcr8Q3UMB5 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smcr8Q3UMB5 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Smcr8Q3UMB5 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.42■□□□□ 0.54
Smcr8Q3UMB5 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smcr8Q3UMB5 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.42■□□□□ 0.54
Smcr8Q3UMB5 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Smcr8Q3UMB5 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Smcr8Q3UMB5 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Smcr8Q3UMB5 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Smcr8Q3UMB5 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Smcr8Q3UMB5 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Smcr8Q3UMB5 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smcr8Q3UMB5 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Smcr8Q3UMB5 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.42■□□□□ 0.54
Smcr8Q3UMB5 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smcr8Q3UMB5 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Smcr8Q3UMB5 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Smcr8Q3UMB5 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Smcr8Q3UMB5 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.42■□□□□ 0.54
Smcr8Q3UMB5 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.42■□□□□ 0.54
Smcr8Q3UMB5 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smcr8Q3UMB5 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.42■□□□□ 0.54
Smcr8Q3UMB5 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.42■□□□□ 0.54
Smcr8Q3UMB5 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.42■□□□□ 0.54
Smcr8Q3UMB5 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.42■□□□□ 0.54
Smcr8Q3UMB5 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smcr8Q3UMB5 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smcr8Q3UMB5 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smcr8Q3UMB5 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smcr8Q3UMB5 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smcr8Q3UMB5 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Smcr8Q3UMB5 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smcr8Q3UMB5 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smcr8Q3UMB5 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smcr8Q3UMB5 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Smcr8Q3UMB5 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smcr8Q3UMB5 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smcr8Q3UMB5 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smcr8Q3UMB5 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smcr8Q3UMB5 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.41■□□□□ 0.54
Smcr8Q3UMB5 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.41■□□□□ 0.54
Smcr8Q3UMB5 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smcr8Q3UMB5 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smcr8Q3UMB5 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smcr8Q3UMB5 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smcr8Q3UMB5 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smcr8Q3UMB5 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smcr8Q3UMB5 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smcr8Q3UMB5 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.4■□□□□ 0.54
Smcr8Q3UMB5 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smcr8Q3UMB5 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smcr8Q3UMB5 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smcr8Q3UMB5 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.4■□□□□ 0.54
Smcr8Q3UMB5 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smcr8Q3UMB5 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smcr8Q3UMB5 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smcr8Q3UMB5 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smcr8Q3UMB5 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Smcr8Q3UMB5 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.39■□□□□ 0.53
Smcr8Q3UMB5 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.39■□□□□ 0.53
Smcr8Q3UMB5 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smcr8Q3UMB5 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms