Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.37■□□□□ 0.85
Col5a2Q3U962 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col5a2Q3U962 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Col5a2Q3U962 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col5a2Q3U962 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC20.37■□□□□ 0.85
Col5a2Q3U962 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC20.37■□□□□ 0.85
Col5a2Q3U962 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Col5a2Q3U962 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col5a2Q3U962 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col5a2Q3U962 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col5a2Q3U962 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col5a2Q3U962 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC20.36■□□□□ 0.85
Col5a2Q3U962 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC20.36■□□□□ 0.85
Col5a2Q3U962 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col5a2Q3U962 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC20.36■□□□□ 0.85
Col5a2Q3U962 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Col5a2Q3U962 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col5a2Q3U962 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col5a2Q3U962 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Col5a2Q3U962 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col5a2Q3U962 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Col5a2Q3U962 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col5a2Q3U962 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col5a2Q3U962 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col5a2Q3U962 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Col5a2Q3U962 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Col5a2Q3U962 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col5a2Q3U962 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col5a2Q3U962 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Col5a2Q3U962 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col5a2Q3U962 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col5a2Q3U962 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col5a2Q3U962 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC20.35■□□□□ 0.85
Col5a2Q3U962 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Col5a2Q3U962 Gm27702-201ENSMUST00000184512 56 ntBASIC20.35■□□□□ 0.85
Col5a2Q3U962 Gm6376-201ENSMUST00000209407 580 ntBASIC20.35■□□□□ 0.85
Col5a2Q3U962 AC160338.1-201ENSMUST00000214232 705 ntBASIC20.35■□□□□ 0.85
Col5a2Q3U962 Gm5364-201ENSMUST00000216789 889 ntBASIC20.35■□□□□ 0.85
Col5a2Q3U962 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
Col5a2Q3U962 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col5a2Q3U962 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col5a2Q3U962 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col5a2Q3U962 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col5a2Q3U962 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col5a2Q3U962 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col5a2Q3U962 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col5a2Q3U962 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col5a2Q3U962 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col5a2Q3U962 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col5a2Q3U962 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Col5a2Q3U962 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC20.34■□□□□ 0.85
Col5a2Q3U962 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
Col5a2Q3U962 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC20.34■□□□□ 0.85
Col5a2Q3U962 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col5a2Q3U962 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col5a2Q3U962 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col5a2Q3U962 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Col5a2Q3U962 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col5a2Q3U962 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Col5a2Q3U962 Phf7-203ENSMUST00000226565 1971 ntBASIC20.33■□□□□ 0.85
Col5a2Q3U962 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Col5a2Q3U962 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC20.33■□□□□ 0.85
Col5a2Q3U962 Gm4995-201ENSMUST00000117247 432 ntBASIC20.33■□□□□ 0.85
Col5a2Q3U962 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC20.33■□□□□ 0.85
Col5a2Q3U962 Cmtm5-203ENSMUST00000227441 610 ntBASIC20.33■□□□□ 0.85
Col5a2Q3U962 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col5a2Q3U962 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col5a2Q3U962 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Col5a2Q3U962 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.33■□□□□ 0.84
Col5a2Q3U962 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Col5a2Q3U962 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.33■□□□□ 0.84
Col5a2Q3U962 Gm32996-201ENSMUST00000199828 1447 ntBASIC20.33■□□□□ 0.84
Col5a2Q3U962 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Col5a2Q3U962 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Col5a2Q3U962 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Col5a2Q3U962 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Col5a2Q3U962 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col5a2Q3U962 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Col5a2Q3U962 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Col5a2Q3U962 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.32■□□□□ 0.84
Col5a2Q3U962 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC20.32■□□□□ 0.84
Col5a2Q3U962 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC20.32■□□□□ 0.84
Col5a2Q3U962 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col5a2Q3U962 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Col5a2Q3U962 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Col5a2Q3U962 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col5a2Q3U962 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Col5a2Q3U962 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.32■□□□□ 0.84
Col5a2Q3U962 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col5a2Q3U962 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col5a2Q3U962 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col5a2Q3U962 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Col5a2Q3U962 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Col5a2Q3U962 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Col5a2Q3U962 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC20.31■□□□□ 0.84
Col5a2Q3U962 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col5a2Q3U962 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col5a2Q3U962 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col5a2Q3U962 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col5a2Q3U962 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms