Protein–RNA interactions for Protein: Q3U1Y4

Dennd4b, DENN domain-containing protein 4B, mousemouse

Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dennd4bQ3U1Y4 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
Dennd4bQ3U1Y4 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Dennd4bQ3U1Y4 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Dennd4bQ3U1Y4 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Dennd4bQ3U1Y4 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Dennd4bQ3U1Y4 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Dennd4bQ3U1Y4 Gm10052-201ENSMUST00000168019 960 ntBASIC25.16■■□□□ 1.62
Dennd4bQ3U1Y4 Gm7729-201ENSMUST00000050143 801 ntBASIC25.16■■□□□ 1.62
Dennd4bQ3U1Y4 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Dennd4bQ3U1Y4 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Dennd4bQ3U1Y4 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC25.16■■□□□ 1.62
Dennd4bQ3U1Y4 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Dennd4bQ3U1Y4 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Dennd4bQ3U1Y4 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Dennd4bQ3U1Y4 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
Dennd4bQ3U1Y4 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Dennd4bQ3U1Y4 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Dennd4bQ3U1Y4 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Dennd4bQ3U1Y4 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Dennd4bQ3U1Y4 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Dennd4bQ3U1Y4 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC25.15■■□□□ 1.62
Dennd4bQ3U1Y4 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Dennd4bQ3U1Y4 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC25.14■■□□□ 1.62
Dennd4bQ3U1Y4 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Dennd4bQ3U1Y4 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Dennd4bQ3U1Y4 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Dennd4bQ3U1Y4 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
Dennd4bQ3U1Y4 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
Dennd4bQ3U1Y4 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Dennd4bQ3U1Y4 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Dennd4bQ3U1Y4 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC25.14■■□□□ 1.61
Dennd4bQ3U1Y4 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Dennd4bQ3U1Y4 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Dennd4bQ3U1Y4 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
Dennd4bQ3U1Y4 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC25.14■■□□□ 1.61
Dennd4bQ3U1Y4 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Dennd4bQ3U1Y4 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Dennd4bQ3U1Y4 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Dennd4bQ3U1Y4 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC25.13■■□□□ 1.61
Dennd4bQ3U1Y4 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Dennd4bQ3U1Y4 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC25.13■■□□□ 1.61
Dennd4bQ3U1Y4 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Dennd4bQ3U1Y4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Dennd4bQ3U1Y4 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Dennd4bQ3U1Y4 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
Dennd4bQ3U1Y4 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Dennd4bQ3U1Y4 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Dennd4bQ3U1Y4 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Dennd4bQ3U1Y4 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Dennd4bQ3U1Y4 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Dennd4bQ3U1Y4 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Dennd4bQ3U1Y4 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Dennd4bQ3U1Y4 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Dennd4bQ3U1Y4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
Dennd4bQ3U1Y4 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Dennd4bQ3U1Y4 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Dennd4bQ3U1Y4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Dennd4bQ3U1Y4 Gm43182-201ENSMUST00000199476 2528 ntBASIC25.11■■□□□ 1.61
Dennd4bQ3U1Y4 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
Dennd4bQ3U1Y4 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Dennd4bQ3U1Y4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC25.1■■□□□ 1.61
Dennd4bQ3U1Y4 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Dennd4bQ3U1Y4 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Dennd4bQ3U1Y4 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Dennd4bQ3U1Y4 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC25.1■■□□□ 1.61
Dennd4bQ3U1Y4 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Dennd4bQ3U1Y4 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Dennd4bQ3U1Y4 Gm2651-201ENSMUST00000203560 838 ntBASIC25.1■■□□□ 1.61
Dennd4bQ3U1Y4 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Dennd4bQ3U1Y4 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Dennd4bQ3U1Y4 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC25.09■■□□□ 1.61
Dennd4bQ3U1Y4 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
Dennd4bQ3U1Y4 Gm15372-201ENSMUST00000120729 834 ntBASIC25.09■■□□□ 1.61
Dennd4bQ3U1Y4 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Dennd4bQ3U1Y4 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC25.09■■□□□ 1.61
Dennd4bQ3U1Y4 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC25.09■■□□□ 1.61
Dennd4bQ3U1Y4 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC25.09■■□□□ 1.61
Dennd4bQ3U1Y4 AC125350.1-201ENSMUST00000225115 903 ntBASIC25.09■■□□□ 1.61
Dennd4bQ3U1Y4 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Dennd4bQ3U1Y4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Dennd4bQ3U1Y4 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Dennd4bQ3U1Y4 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Dennd4bQ3U1Y4 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC25.09■■□□□ 1.61
Dennd4bQ3U1Y4 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC25.09■■□□□ 1.61
Dennd4bQ3U1Y4 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Dennd4bQ3U1Y4 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Dennd4bQ3U1Y4 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Dennd4bQ3U1Y4 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Dennd4bQ3U1Y4 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Dennd4bQ3U1Y4 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Dennd4bQ3U1Y4 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Dennd4bQ3U1Y4 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Dennd4bQ3U1Y4 Zkscan4-202ENSMUST00000225845 1506 ntBASIC25.08■■□□□ 1.61
Dennd4bQ3U1Y4 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC25.08■■□□□ 1.6
Dennd4bQ3U1Y4 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Dennd4bQ3U1Y4 AC161829.1-201ENSMUST00000220298 281 ntBASIC25.08■■□□□ 1.6
Dennd4bQ3U1Y4 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.6
Dennd4bQ3U1Y4 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC25.08■■□□□ 1.6
Dennd4bQ3U1Y4 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
Dennd4bQ3U1Y4 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms