Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cul4aQ3TCH7 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cul4aQ3TCH7 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cul4aQ3TCH7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cul4aQ3TCH7 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cul4aQ3TCH7 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cul4aQ3TCH7 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.03■□□□□ 0.48
Cul4aQ3TCH7 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cul4aQ3TCH7 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cul4aQ3TCH7 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cul4aQ3TCH7 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cul4aQ3TCH7 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cul4aQ3TCH7 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.03■□□□□ 0.48
Cul4aQ3TCH7 Gm37292-201ENSMUST00000192062 758 ntBASIC18.03■□□□□ 0.48
Cul4aQ3TCH7 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cul4aQ3TCH7 Gm4974-201ENSMUST00000209974 875 ntBASIC18.03■□□□□ 0.48
Cul4aQ3TCH7 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cul4aQ3TCH7 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cul4aQ3TCH7 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cul4aQ3TCH7 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cul4aQ3TCH7 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cul4aQ3TCH7 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cul4aQ3TCH7 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cul4aQ3TCH7 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cul4aQ3TCH7 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.03■□□□□ 0.48
Cul4aQ3TCH7 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cul4aQ3TCH7 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cul4aQ3TCH7 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.02■□□□□ 0.48
Cul4aQ3TCH7 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cul4aQ3TCH7 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cul4aQ3TCH7 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cul4aQ3TCH7 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.02■□□□□ 0.48
Cul4aQ3TCH7 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cul4aQ3TCH7 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cul4aQ3TCH7 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Cul4aQ3TCH7 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Cul4aQ3TCH7 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Cul4aQ3TCH7 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
Cul4aQ3TCH7 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.01■□□□□ 0.47
Cul4aQ3TCH7 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cul4aQ3TCH7 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cul4aQ3TCH7 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Cul4aQ3TCH7 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cul4aQ3TCH7 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cul4aQ3TCH7 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cul4aQ3TCH7 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cul4aQ3TCH7 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.01■□□□□ 0.47
Cul4aQ3TCH7 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cul4aQ3TCH7 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cul4aQ3TCH7 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Cul4aQ3TCH7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cul4aQ3TCH7 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.01■□□□□ 0.47
Cul4aQ3TCH7 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cul4aQ3TCH7 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cul4aQ3TCH7 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cul4aQ3TCH7 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cul4aQ3TCH7 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cul4aQ3TCH7 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cul4aQ3TCH7 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cul4aQ3TCH7 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Cul4aQ3TCH7 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cul4aQ3TCH7 Gm36858-201ENSMUST00000194501 2391 ntBASIC18■□□□□ 0.47
Cul4aQ3TCH7 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Cul4aQ3TCH7 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cul4aQ3TCH7 Gm27275-201ENSMUST00000184318 272 ntBASIC18■□□□□ 0.47
Cul4aQ3TCH7 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18■□□□□ 0.47
Cul4aQ3TCH7 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18■□□□□ 0.47
Cul4aQ3TCH7 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cul4aQ3TCH7 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cul4aQ3TCH7 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Cul4aQ3TCH7 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Cul4aQ3TCH7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cul4aQ3TCH7 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cul4aQ3TCH7 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Cul4aQ3TCH7 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cul4aQ3TCH7 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.99■□□□□ 0.47
Cul4aQ3TCH7 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cul4aQ3TCH7 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cul4aQ3TCH7 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cul4aQ3TCH7 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cul4aQ3TCH7 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cul4aQ3TCH7 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cul4aQ3TCH7 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cul4aQ3TCH7 Gm10602-201ENSMUST00000098239 609 ntBASIC17.99■□□□□ 0.47
Cul4aQ3TCH7 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cul4aQ3TCH7 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cul4aQ3TCH7 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cul4aQ3TCH7 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Cul4aQ3TCH7 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cul4aQ3TCH7 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cul4aQ3TCH7 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cul4aQ3TCH7 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Cul4aQ3TCH7 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cul4aQ3TCH7 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Cul4aQ3TCH7 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cul4aQ3TCH7 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cul4aQ3TCH7 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.98■□□□□ 0.47
Cul4aQ3TCH7 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.98■□□□□ 0.47
Cul4aQ3TCH7 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cul4aQ3TCH7 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms