Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Col19a1Q0VF58 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col19a1Q0VF58 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col19a1Q0VF58 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col19a1Q0VF58 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.31■□□□□ 0.52
Col19a1Q0VF58 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col19a1Q0VF58 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col19a1Q0VF58 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.31■□□□□ 0.52
Col19a1Q0VF58 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col19a1Q0VF58 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.31■□□□□ 0.52
Col19a1Q0VF58 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.31■□□□□ 0.52
Col19a1Q0VF58 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Col19a1Q0VF58 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col19a1Q0VF58 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col19a1Q0VF58 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col19a1Q0VF58 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.31■□□□□ 0.52
Col19a1Q0VF58 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.3■□□□□ 0.52
Col19a1Q0VF58 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.3■□□□□ 0.52
Col19a1Q0VF58 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col19a1Q0VF58 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col19a1Q0VF58 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Col19a1Q0VF58 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.3■□□□□ 0.52
Col19a1Q0VF58 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.3■□□□□ 0.52
Col19a1Q0VF58 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col19a1Q0VF58 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col19a1Q0VF58 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.3■□□□□ 0.52
Col19a1Q0VF58 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC18.3■□□□□ 0.52
Col19a1Q0VF58 Gm27000-201ENSMUST00000182943 842 ntBASIC18.3■□□□□ 0.52
Col19a1Q0VF58 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC18.3■□□□□ 0.52
Col19a1Q0VF58 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.3■□□□□ 0.52
Col19a1Q0VF58 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.3■□□□□ 0.52
Col19a1Q0VF58 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col19a1Q0VF58 Gm15590-201ENSMUST00000078419 552 ntBASIC18.3■□□□□ 0.52
Col19a1Q0VF58 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col19a1Q0VF58 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col19a1Q0VF58 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col19a1Q0VF58 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col19a1Q0VF58 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col19a1Q0VF58 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col19a1Q0VF58 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col19a1Q0VF58 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col19a1Q0VF58 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col19a1Q0VF58 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.29■□□□□ 0.52
Col19a1Q0VF58 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.29■□□□□ 0.52
Col19a1Q0VF58 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col19a1Q0VF58 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col19a1Q0VF58 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col19a1Q0VF58 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col19a1Q0VF58 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Col19a1Q0VF58 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col19a1Q0VF58 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.29■□□□□ 0.52
Col19a1Q0VF58 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Col19a1Q0VF58 Mir8112-201ENSMUST00000184382 131 ntBASIC18.29■□□□□ 0.52
Col19a1Q0VF58 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.29■□□□□ 0.52
Col19a1Q0VF58 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Col19a1Q0VF58 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col19a1Q0VF58 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Col19a1Q0VF58 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col19a1Q0VF58 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col19a1Q0VF58 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col19a1Q0VF58 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.29■□□□□ 0.52
Col19a1Q0VF58 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col19a1Q0VF58 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col19a1Q0VF58 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col19a1Q0VF58 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col19a1Q0VF58 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col19a1Q0VF58 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col19a1Q0VF58 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col19a1Q0VF58 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Col19a1Q0VF58 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col19a1Q0VF58 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col19a1Q0VF58 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col19a1Q0VF58 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC18.28■□□□□ 0.52
Col19a1Q0VF58 Gm15173-201ENSMUST00000122049 433 ntBASIC18.28■□□□□ 0.52
Col19a1Q0VF58 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.28■□□□□ 0.52
Col19a1Q0VF58 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col19a1Q0VF58 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.28■□□□□ 0.52
Col19a1Q0VF58 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Col19a1Q0VF58 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.28■□□□□ 0.52
Col19a1Q0VF58 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Col19a1Q0VF58 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.28■□□□□ 0.52
Col19a1Q0VF58 Gm5186-201ENSMUST00000218781 920 ntBASIC18.28■□□□□ 0.52
Col19a1Q0VF58 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.28■□□□□ 0.52
Col19a1Q0VF58 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Col19a1Q0VF58 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col19a1Q0VF58 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col19a1Q0VF58 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col19a1Q0VF58 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Col19a1Q0VF58 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col19a1Q0VF58 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col19a1Q0VF58 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col19a1Q0VF58 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col19a1Q0VF58 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col19a1Q0VF58 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col19a1Q0VF58 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col19a1Q0VF58 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Col19a1Q0VF58 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Col19a1Q0VF58 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col19a1Q0VF58 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.27■□□□□ 0.52
Col19a1Q0VF58 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms