Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Tff1Q08423 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tff1Q08423 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tff1Q08423 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tff1Q08423 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tff1Q08423 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tff1Q08423 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tff1Q08423 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tff1Q08423 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tff1Q08423 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tff1Q08423 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tff1Q08423 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Tff1Q08423 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
Tff1Q08423 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tff1Q08423 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.26□□□□□ -0.13
Tff1Q08423 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tff1Q08423 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tff1Q08423 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.26□□□□□ -0.13
Tff1Q08423 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Tff1Q08423 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.26□□□□□ -0.13
Tff1Q08423 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.26□□□□□ -0.13
Tff1Q08423 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.26□□□□□ -0.13
Tff1Q08423 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tff1Q08423 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tff1Q08423 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tff1Q08423 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tff1Q08423 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tff1Q08423 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tff1Q08423 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tff1Q08423 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tff1Q08423 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tff1Q08423 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tff1Q08423 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tff1Q08423 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.26□□□□□ -0.13
Tff1Q08423 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Tff1Q08423 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tff1Q08423 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tff1Q08423 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.25□□□□□ -0.13
Tff1Q08423 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tff1Q08423 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tff1Q08423 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tff1Q08423 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tff1Q08423 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tff1Q08423 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tff1Q08423 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Tff1Q08423 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14.25□□□□□ -0.13
Tff1Q08423 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tff1Q08423 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Tff1Q08423 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tff1Q08423 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tff1Q08423 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tff1Q08423 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tff1Q08423 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tff1Q08423 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tff1Q08423 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.25□□□□□ -0.13
Tff1Q08423 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tff1Q08423 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tff1Q08423 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Tff1Q08423 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.25□□□□□ -0.13
Tff1Q08423 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tff1Q08423 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tff1Q08423 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tff1Q08423 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tff1Q08423 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tff1Q08423 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tff1Q08423 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tff1Q08423 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.24□□□□□ -0.13
Tff1Q08423 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tff1Q08423 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tff1Q08423 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tff1Q08423 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tff1Q08423 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.24□□□□□ -0.13
Tff1Q08423 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Tff1Q08423 Gm5643-201ENSMUST00000117081 966 ntBASIC14.24□□□□□ -0.13
Tff1Q08423 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tff1Q08423 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Tff1Q08423 Gm38285-201ENSMUST00000192928 922 ntBASIC14.24□□□□□ -0.13
Tff1Q08423 Gm2559-201ENSMUST00000201323 363 ntBASIC14.24□□□□□ -0.13
Tff1Q08423 Gm29791-202ENSMUST00000207888 369 ntBASIC14.24□□□□□ -0.13
Tff1Q08423 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tff1Q08423 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tff1Q08423 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Tff1Q08423 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tff1Q08423 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tff1Q08423 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tff1Q08423 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tff1Q08423 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.24□□□□□ -0.13
Tff1Q08423 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tff1Q08423 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tff1Q08423 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tff1Q08423 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.23□□□□□ -0.13
Tff1Q08423 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tff1Q08423 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tff1Q08423 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tff1Q08423 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tff1Q08423 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tff1Q08423 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tff1Q08423 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.23□□□□□ -0.13
Tff1Q08423 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.23□□□□□ -0.13
Tff1Q08423 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms