Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdx4Q07424 Gm715-201ENSMUST00000117865 831 ntBASIC13.28□□□□□ -0.28
Cdx4Q07424 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC13.28□□□□□ -0.28
Cdx4Q07424 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdx4Q07424 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdx4Q07424 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdx4Q07424 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdx4Q07424 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdx4Q07424 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdx4Q07424 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdx4Q07424 CT010444.2-201ENSMUST00000217877 1629 ntBASIC13.28□□□□□ -0.28
Cdx4Q07424 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdx4Q07424 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdx4Q07424 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.27□□□□□ -0.28
Cdx4Q07424 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdx4Q07424 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cdx4Q07424 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdx4Q07424 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Cdx4Q07424 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC13.27□□□□□ -0.29
Cdx4Q07424 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx4Q07424 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Cdx4Q07424 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC13.27□□□□□ -0.29
Cdx4Q07424 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx4Q07424 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx4Q07424 Gm6598-201ENSMUST00000202719 2615 ntBASIC13.27□□□□□ -0.29
Cdx4Q07424 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx4Q07424 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx4Q07424 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.27□□□□□ -0.29
Cdx4Q07424 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx4Q07424 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx4Q07424 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx4Q07424 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx4Q07424 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx4Q07424 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx4Q07424 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx4Q07424 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx4Q07424 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx4Q07424 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx4Q07424 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx4Q07424 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx4Q07424 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdx4Q07424 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cdx4Q07424 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.26□□□□□ -0.29
Cdx4Q07424 Mir1199-201ENSMUST00000117015 119 ntBASIC13.26□□□□□ -0.29
Cdx4Q07424 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cdx4Q07424 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
Cdx4Q07424 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC13.26□□□□□ -0.29
Cdx4Q07424 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdx4Q07424 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Cdx4Q07424 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Cdx4Q07424 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC13.26□□□□□ -0.29
Cdx4Q07424 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdx4Q07424 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdx4Q07424 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdx4Q07424 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Cdx4Q07424 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdx4Q07424 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdx4Q07424 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cdx4Q07424 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdx4Q07424 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdx4Q07424 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx4Q07424 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Cdx4Q07424 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx4Q07424 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.25□□□□□ -0.29
Cdx4Q07424 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx4Q07424 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Cdx4Q07424 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx4Q07424 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx4Q07424 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC13.25□□□□□ -0.29
Cdx4Q07424 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx4Q07424 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx4Q07424 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx4Q07424 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC13.25□□□□□ -0.29
Cdx4Q07424 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx4Q07424 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC13.25□□□□□ -0.29
Cdx4Q07424 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx4Q07424 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx4Q07424 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx4Q07424 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx4Q07424 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx4Q07424 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx4Q07424 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC13.25□□□□□ -0.29
Cdx4Q07424 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx4Q07424 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx4Q07424 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Cdx4Q07424 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx4Q07424 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx4Q07424 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Cdx4Q07424 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx4Q07424 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Cdx4Q07424 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx4Q07424 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx4Q07424 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx4Q07424 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx4Q07424 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx4Q07424 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Cdx4Q07424 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx4Q07424 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx4Q07424 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx4Q07424 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms