Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.66□□□□□ -0.38
Hspg2Q05793 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hspg2Q05793 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Hspg2Q05793 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.66□□□□□ -0.38
Hspg2Q05793 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hspg2Q05793 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hspg2Q05793 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.66□□□□□ -0.38
Hspg2Q05793 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Hspg2Q05793 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hspg2Q05793 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Hspg2Q05793 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hspg2Q05793 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hspg2Q05793 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hspg2Q05793 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC12.66□□□□□ -0.38
Hspg2Q05793 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hspg2Q05793 Gm19721-201ENSMUST00000195284 1764 ntBASIC12.65□□□□□ -0.38
Hspg2Q05793 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hspg2Q05793 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hspg2Q05793 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hspg2Q05793 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hspg2Q05793 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hspg2Q05793 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hspg2Q05793 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hspg2Q05793 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.65□□□□□ -0.38
Hspg2Q05793 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hspg2Q05793 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.65□□□□□ -0.38
Hspg2Q05793 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Hspg2Q05793 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hspg2Q05793 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Hspg2Q05793 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.39
Hspg2Q05793 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hspg2Q05793 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Hspg2Q05793 Grk6-207ENSMUST00000225925 2769 ntBASIC12.64□□□□□ -0.39
Hspg2Q05793 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hspg2Q05793 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.64□□□□□ -0.39
Hspg2Q05793 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.64□□□□□ -0.39
Hspg2Q05793 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.64□□□□□ -0.39
Hspg2Q05793 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hspg2Q05793 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hspg2Q05793 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC12.64□□□□□ -0.39
Hspg2Q05793 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hspg2Q05793 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hspg2Q05793 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hspg2Q05793 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.64□□□□□ -0.39
Hspg2Q05793 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hspg2Q05793 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Hspg2Q05793 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hspg2Q05793 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hspg2Q05793 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hspg2Q05793 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hspg2Q05793 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Hspg2Q05793 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Hspg2Q05793 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hspg2Q05793 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hspg2Q05793 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hspg2Q05793 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC12.64□□□□□ -0.39
Hspg2Q05793 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.64□□□□□ -0.39
Hspg2Q05793 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hspg2Q05793 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hspg2Q05793 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hspg2Q05793 Gm7856-201ENSMUST00000117514 1493 ntBASIC12.64□□□□□ -0.39
Hspg2Q05793 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hspg2Q05793 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hspg2Q05793 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hspg2Q05793 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hspg2Q05793 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hspg2Q05793 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hspg2Q05793 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.63□□□□□ -0.39
Hspg2Q05793 Gm14822-201ENSMUST00000122247 291 ntBASIC12.63□□□□□ -0.39
Hspg2Q05793 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.63□□□□□ -0.39
Hspg2Q05793 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.63□□□□□ -0.39
Hspg2Q05793 Gm5264-201ENSMUST00000190584 848 ntBASIC12.63□□□□□ -0.39
Hspg2Q05793 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC12.63□□□□□ -0.39
Hspg2Q05793 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hspg2Q05793 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hspg2Q05793 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hspg2Q05793 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC12.63□□□□□ -0.39
Hspg2Q05793 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Hspg2Q05793 Gm1401-201ENSMUST00000122048 772 ntBASIC12.63□□□□□ -0.39
Hspg2Q05793 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.63□□□□□ -0.39
Hspg2Q05793 Gm5364-201ENSMUST00000216789 889 ntBASIC12.63□□□□□ -0.39
Hspg2Q05793 Gm5186-201ENSMUST00000218781 920 ntBASIC12.63□□□□□ -0.39
Hspg2Q05793 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hspg2Q05793 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hspg2Q05793 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hspg2Q05793 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hspg2Q05793 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC12.63□□□□□ -0.39
Hspg2Q05793 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Hspg2Q05793 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hspg2Q05793 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.63□□□□□ -0.39
Hspg2Q05793 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hspg2Q05793 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hspg2Q05793 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC12.63□□□□□ -0.39
Hspg2Q05793 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hspg2Q05793 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC12.62□□□□□ -0.39
Hspg2Q05793 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hspg2Q05793 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hspg2Q05793 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.62□□□□□ -0.39
Hspg2Q05793 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hspg2Q05793 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms