Protein–RNA interactions for Protein: P97785

Gfra1, GDNF family receptor alpha-1, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra1P97785 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gfra1P97785 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gfra1P97785 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Gfra1P97785 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gfra1P97785 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gfra1P97785 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gfra1P97785 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gfra1P97785 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gfra1P97785 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.2□□□□□ -0.14
Gfra1P97785 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.2□□□□□ -0.14
Gfra1P97785 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gfra1P97785 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gfra1P97785 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Gfra1P97785 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gfra1P97785 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Gfra1P97785 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gfra1P97785 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gfra1P97785 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gfra1P97785 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gfra1P97785 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.19□□□□□ -0.14
Gfra1P97785 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gfra1P97785 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gfra1P97785 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gfra1P97785 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gfra1P97785 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gfra1P97785 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.19□□□□□ -0.14
Gfra1P97785 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.19□□□□□ -0.14
Gfra1P97785 Mir8112-201ENSMUST00000184382 131 ntBASIC14.19□□□□□ -0.14
Gfra1P97785 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.19□□□□□ -0.14
Gfra1P97785 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.19□□□□□ -0.14
Gfra1P97785 Gm45058-201ENSMUST00000205810 766 ntBASIC14.19□□□□□ -0.14
Gfra1P97785 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.19□□□□□ -0.14
Gfra1P97785 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gfra1P97785 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gfra1P97785 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Gfra1P97785 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gfra1P97785 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Gfra1P97785 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gfra1P97785 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gfra1P97785 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gfra1P97785 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gfra1P97785 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gfra1P97785 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Gfra1P97785 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Gfra1P97785 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gfra1P97785 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gfra1P97785 Mir5130-201ENSMUST00000175160 84 ntBASIC14.18□□□□□ -0.14
Gfra1P97785 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gfra1P97785 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gfra1P97785 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gfra1P97785 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gfra1P97785 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gfra1P97785 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gfra1P97785 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gfra1P97785 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Gfra1P97785 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.18□□□□□ -0.14
Gfra1P97785 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gfra1P97785 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gfra1P97785 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gfra1P97785 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gfra1P97785 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gfra1P97785 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gfra1P97785 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Gfra1P97785 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Gfra1P97785 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Gfra1P97785 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gfra1P97785 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gfra1P97785 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Gfra1P97785 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gfra1P97785 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
Gfra1P97785 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gfra1P97785 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.17□□□□□ -0.14
Gfra1P97785 Gm16061-201ENSMUST00000122167 857 ntBASIC14.17□□□□□ -0.14
Gfra1P97785 Gm13474-201ENSMUST00000122466 815 ntBASIC14.17□□□□□ -0.14
Gfra1P97785 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gfra1P97785 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Gfra1P97785 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gfra1P97785 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gfra1P97785 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.17□□□□□ -0.14
Gfra1P97785 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gfra1P97785 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gfra1P97785 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Gfra1P97785 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gfra1P97785 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gfra1P97785 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gfra1P97785 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Gfra1P97785 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gfra1P97785 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gfra1P97785 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gfra1P97785 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Gfra1P97785 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gfra1P97785 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gfra1P97785 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Gfra1P97785 Gm7791-201ENSMUST00000219066 539 ntBASIC14.16□□□□□ -0.14
Gfra1P97785 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.16□□□□□ -0.14
Gfra1P97785 Il3ra-202ENSMUST00000223589 738 ntBASIC14.16□□□□□ -0.14
Gfra1P97785 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gfra1P97785 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gfra1P97785 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.16□□□□□ -0.14
Gfra1P97785 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms