Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Npas1P97459 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Npas1P97459 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Npas1P97459 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Npas1P97459 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Npas1P97459 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Npas1P97459 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.42□□□□□ -0.1
Npas1P97459 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Npas1P97459 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Npas1P97459 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Npas1P97459 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Npas1P97459 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Npas1P97459 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Npas1P97459 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.42□□□□□ -0.1
Npas1P97459 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Npas1P97459 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Npas1P97459 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Npas1P97459 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.41□□□□□ -0.1
Npas1P97459 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Npas1P97459 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Npas1P97459 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Npas1P97459 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Npas1P97459 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Npas1P97459 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Npas1P97459 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Npas1P97459 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Npas1P97459 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Npas1P97459 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Npas1P97459 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Npas1P97459 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
Npas1P97459 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Npas1P97459 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Npas1P97459 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Npas1P97459 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Npas1P97459 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Npas1P97459 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Npas1P97459 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Npas1P97459 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Npas1P97459 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Npas1P97459 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.41□□□□□ -0.1
Npas1P97459 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Npas1P97459 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Npas1P97459 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.4□□□□□ -0.1
Npas1P97459 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Npas1P97459 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Npas1P97459 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.4□□□□□ -0.1
Npas1P97459 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Npas1P97459 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.4□□□□□ -0.1
Npas1P97459 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Npas1P97459 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.4□□□□□ -0.1
Npas1P97459 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Npas1P97459 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Npas1P97459 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Npas1P97459 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Npas1P97459 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Npas1P97459 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.4□□□□□ -0.1
Npas1P97459 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Npas1P97459 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Npas1P97459 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Npas1P97459 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Npas1P97459 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.4□□□□□ -0.1
Npas1P97459 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Npas1P97459 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.39□□□□□ -0.11
Npas1P97459 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Npas1P97459 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Npas1P97459 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Npas1P97459 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Npas1P97459 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Npas1P97459 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Npas1P97459 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.39□□□□□ -0.11
Npas1P97459 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Npas1P97459 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Npas1P97459 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Npas1P97459 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Npas1P97459 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Npas1P97459 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Npas1P97459 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Npas1P97459 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Npas1P97459 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Npas1P97459 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Npas1P97459 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Npas1P97459 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC14.39□□□□□ -0.11
Npas1P97459 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.39□□□□□ -0.11
Npas1P97459 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Npas1P97459 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Npas1P97459 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
Npas1P97459 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.38□□□□□ -0.11
Npas1P97459 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Npas1P97459 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Npas1P97459 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Npas1P97459 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Npas1P97459 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Npas1P97459 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Npas1P97459 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Npas1P97459 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC14.38□□□□□ -0.11
Npas1P97459 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Npas1P97459 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Npas1P97459 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Npas1P97459 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Npas1P97459 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms