Protein–RNA interactions for Protein: P70388

Rad50, DNA repair protein RAD50, mousemouse

Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad50P70388 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rad50P70388 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rad50P70388 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
Rad50P70388 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Rad50P70388 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rad50P70388 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rad50P70388 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rad50P70388 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rad50P70388 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rad50P70388 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rad50P70388 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rad50P70388 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Rad50P70388 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.59■□□□□ 0.89
Rad50P70388 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.59■□□□□ 0.89
Rad50P70388 Gm11539-201ENSMUST00000119837 557 ntBASIC20.59■□□□□ 0.89
Rad50P70388 Gm13436-201ENSMUST00000120418 567 ntBASIC20.59■□□□□ 0.89
Rad50P70388 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Rad50P70388 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rad50P70388 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rad50P70388 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Rad50P70388 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rad50P70388 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rad50P70388 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rad50P70388 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rad50P70388 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rad50P70388 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rad50P70388 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rad50P70388 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.58■□□□□ 0.89
Rad50P70388 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rad50P70388 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rad50P70388 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Rad50P70388 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.58■□□□□ 0.88
Rad50P70388 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rad50P70388 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Rad50P70388 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rad50P70388 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rad50P70388 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rad50P70388 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rad50P70388 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rad50P70388 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rad50P70388 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Rad50P70388 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rad50P70388 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rad50P70388 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rad50P70388 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rad50P70388 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rad50P70388 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rad50P70388 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rad50P70388 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rad50P70388 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.57■□□□□ 0.88
Rad50P70388 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rad50P70388 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rad50P70388 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rad50P70388 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rad50P70388 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rad50P70388 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.56■□□□□ 0.88
Rad50P70388 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rad50P70388 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rad50P70388 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rad50P70388 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Rad50P70388 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rad50P70388 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Rad50P70388 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC20.56■□□□□ 0.88
Rad50P70388 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Rad50P70388 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rad50P70388 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rad50P70388 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Rad50P70388 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.55■□□□□ 0.88
Rad50P70388 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Rad50P70388 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.55■□□□□ 0.88
Rad50P70388 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rad50P70388 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rad50P70388 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rad50P70388 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rad50P70388 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rad50P70388 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Rad50P70388 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rad50P70388 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rad50P70388 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rad50P70388 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.54■□□□□ 0.88
Rad50P70388 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rad50P70388 Gm7889-201ENSMUST00000185591 958 ntBASIC20.54■□□□□ 0.88
Rad50P70388 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rad50P70388 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.54■□□□□ 0.88
Rad50P70388 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rad50P70388 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rad50P70388 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rad50P70388 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rad50P70388 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rad50P70388 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rad50P70388 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rad50P70388 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rad50P70388 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rad50P70388 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.54■□□□□ 0.88
Rad50P70388 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rad50P70388 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rad50P70388 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.54■□□□□ 0.88
Rad50P70388 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rad50P70388 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.53■□□□□ 0.88
Rad50P70388 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms