Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pfn1P62962 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pfn1P62962 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Pfn1P62962 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pfn1P62962 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pfn1P62962 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pfn1P62962 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC13.36□□□□□ -0.27
Pfn1P62962 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Pfn1P62962 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pfn1P62962 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC13.36□□□□□ -0.27
Pfn1P62962 AC160393.1-201ENSMUST00000218378 1279 ntBASIC13.36□□□□□ -0.27
Pfn1P62962 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pfn1P62962 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pfn1P62962 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Pfn1P62962 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pfn1P62962 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pfn1P62962 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pfn1P62962 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Pfn1P62962 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pfn1P62962 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pfn1P62962 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Pfn1P62962 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pfn1P62962 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pfn1P62962 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pfn1P62962 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pfn1P62962 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Pfn1P62962 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pfn1P62962 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pfn1P62962 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Pfn1P62962 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pfn1P62962 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pfn1P62962 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pfn1P62962 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pfn1P62962 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Pfn1P62962 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.35□□□□□ -0.27
Pfn1P62962 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Pfn1P62962 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pfn1P62962 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pfn1P62962 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC13.35□□□□□ -0.27
Pfn1P62962 Gm43017-201ENSMUST00000198296 752 ntBASIC13.35□□□□□ -0.27
Pfn1P62962 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pfn1P62962 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pfn1P62962 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pfn1P62962 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pfn1P62962 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pfn1P62962 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pfn1P62962 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfn1P62962 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pfn1P62962 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfn1P62962 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfn1P62962 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pfn1P62962 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfn1P62962 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC13.34□□□□□ -0.27
Pfn1P62962 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfn1P62962 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Pfn1P62962 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC13.34□□□□□ -0.27
Pfn1P62962 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfn1P62962 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfn1P62962 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC13.34□□□□□ -0.27
Pfn1P62962 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC13.34□□□□□ -0.27
Pfn1P62962 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pfn1P62962 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfn1P62962 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfn1P62962 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Pfn1P62962 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfn1P62962 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfn1P62962 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfn1P62962 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfn1P62962 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfn1P62962 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfn1P62962 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Pfn1P62962 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pfn1P62962 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfn1P62962 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pfn1P62962 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pfn1P62962 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pfn1P62962 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.27
Pfn1P62962 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pfn1P62962 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pfn1P62962 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.33□□□□□ -0.28
Pfn1P62962 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfn1P62962 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfn1P62962 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC13.33□□□□□ -0.28
Pfn1P62962 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfn1P62962 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfn1P62962 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfn1P62962 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pfn1P62962 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfn1P62962 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfn1P62962 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC13.33□□□□□ -0.28
Pfn1P62962 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pfn1P62962 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC13.33□□□□□ -0.28
Pfn1P62962 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Pfn1P62962 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pfn1P62962 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pfn1P62962 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC13.33□□□□□ -0.28
Pfn1P62962 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfn1P62962 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfn1P62962 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pfn1P62962 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms