Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rpl39P62892 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpl39P62892 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC12.29□□□□□ -0.44
Rpl39P62892 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpl39P62892 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rpl39P62892 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpl39P62892 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpl39P62892 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpl39P62892 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpl39P62892 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpl39P62892 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rpl39P62892 Nespas-201ENSMUST00000143738 1083 ntBASIC12.29□□□□□ -0.44
Rpl39P62892 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC12.29□□□□□ -0.44
Rpl39P62892 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC12.29□□□□□ -0.44
Rpl39P62892 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpl39P62892 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpl39P62892 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rpl39P62892 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC12.29□□□□□ -0.44
Rpl39P62892 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpl39P62892 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpl39P62892 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpl39P62892 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpl39P62892 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC12.29□□□□□ -0.44
Rpl39P62892 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rpl39P62892 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.29□□□□□ -0.44
Rpl39P62892 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Rpl39P62892 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl39P62892 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl39P62892 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl39P62892 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl39P62892 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl39P62892 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Rpl39P62892 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl39P62892 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Rpl39P62892 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl39P62892 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl39P62892 Gm6420-201ENSMUST00000193885 723 ntBASIC12.28□□□□□ -0.44
Rpl39P62892 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Rpl39P62892 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC12.28□□□□□ -0.44
Rpl39P62892 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl39P62892 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl39P62892 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl39P62892 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl39P62892 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl39P62892 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl39P62892 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl39P62892 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl39P62892 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl39P62892 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl39P62892 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
Rpl39P62892 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rpl39P62892 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC12.27□□□□□ -0.44
Rpl39P62892 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rpl39P62892 Dancr-204ENSMUST00000132389 2347 ntBASIC12.27□□□□□ -0.44
Rpl39P62892 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rpl39P62892 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl39P62892 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl39P62892 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl39P62892 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Rpl39P62892 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Rpl39P62892 Gm13216-201ENSMUST00000117145 591 ntBASIC12.27□□□□□ -0.45
Rpl39P62892 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Rpl39P62892 Mir8112-201ENSMUST00000184382 131 ntBASIC12.27□□□□□ -0.45
Rpl39P62892 Gm29791-202ENSMUST00000207888 369 ntBASIC12.27□□□□□ -0.45
Rpl39P62892 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl39P62892 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC12.27□□□□□ -0.45
Rpl39P62892 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl39P62892 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl39P62892 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl39P62892 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl39P62892 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Rpl39P62892 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl39P62892 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl39P62892 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl39P62892 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl39P62892 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl39P62892 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl39P62892 Gm42918-201ENSMUST00000199249 1580 ntBASIC12.26□□□□□ -0.45
Rpl39P62892 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Rpl39P62892 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Rpl39P62892 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl39P62892 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl39P62892 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl39P62892 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl39P62892 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Rpl39P62892 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl39P62892 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl39P62892 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Rpl39P62892 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl39P62892 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC12.26□□□□□ -0.45
Rpl39P62892 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
Rpl39P62892 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl39P62892 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl39P62892 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl39P62892 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl39P62892 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl39P62892 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl39P62892 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl39P62892 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl39P62892 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms