Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Gabra1P62812 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Gabra1P62812 Gm43034-201ENSMUST00000198678 1364 ntBASIC14.48□□□□□ -0.09
Gabra1P62812 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.48□□□□□ -0.09
Gabra1P62812 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Gabra1P62812 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gabra1P62812 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gabra1P62812 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Gabra1P62812 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.48□□□□□ -0.09
Gabra1P62812 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC14.48□□□□□ -0.09
Gabra1P62812 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Gabra1P62812 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gabra1P62812 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gabra1P62812 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Gabra1P62812 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gabra1P62812 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gabra1P62812 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gabra1P62812 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Gabra1P62812 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gabra1P62812 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gabra1P62812 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gabra1P62812 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Gabra1P62812 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gabra1P62812 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gabra1P62812 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gabra1P62812 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Gabra1P62812 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.47□□□□□ -0.09
Gabra1P62812 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Gabra1P62812 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gabra1P62812 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Gabra1P62812 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gabra1P62812 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Gabra1P62812 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.47□□□□□ -0.09
Gabra1P62812 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gabra1P62812 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Gabra1P62812 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gabra1P62812 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Gabra1P62812 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gabra1P62812 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gabra1P62812 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gabra1P62812 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gabra1P62812 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Gabra1P62812 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gabra1P62812 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gabra1P62812 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gabra1P62812 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Gabra1P62812 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gabra1P62812 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Gabra1P62812 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gabra1P62812 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Gabra1P62812 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gabra1P62812 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Gabra1P62812 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.46□□□□□ -0.09
Gabra1P62812 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gabra1P62812 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC14.46□□□□□ -0.09
Gabra1P62812 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gabra1P62812 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Gabra1P62812 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gabra1P62812 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gabra1P62812 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gabra1P62812 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gabra1P62812 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Gabra1P62812 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Gabra1P62812 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Gabra1P62812 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Gabra1P62812 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gabra1P62812 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gabra1P62812 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gabra1P62812 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Gabra1P62812 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Gabra1P62812 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gabra1P62812 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gabra1P62812 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gabra1P62812 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gabra1P62812 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Gabra1P62812 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gabra1P62812 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gabra1P62812 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.45□□□□□ -0.1
Gabra1P62812 Gm21956-201ENSMUST00000179946 522 ntBASIC14.45□□□□□ -0.1
Gabra1P62812 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC14.45□□□□□ -0.1
Gabra1P62812 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC14.45□□□□□ -0.1
Gabra1P62812 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gabra1P62812 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gabra1P62812 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gabra1P62812 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gabra1P62812 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gabra1P62812 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gabra1P62812 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gabra1P62812 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.45□□□□□ -0.1
Gabra1P62812 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gabra1P62812 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gabra1P62812 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.45□□□□□ -0.1
Gabra1P62812 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.44□□□□□ -0.1
Gabra1P62812 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gabra1P62812 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gabra1P62812 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gabra1P62812 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gabra1P62812 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Gabra1P62812 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gabra1P62812 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms