Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.04■□□□□ -0
Lsm6P62313 Gm17661-201ENSMUST00000170317 270 ntBASIC15.04■□□□□ -0
Lsm6P62313 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.04■□□□□ -0
Lsm6P62313 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Lsm6P62313 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lsm6P62313 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lsm6P62313 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Lsm6P62313 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.04■□□□□ -0
Lsm6P62313 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.04■□□□□ -0
Lsm6P62313 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lsm6P62313 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lsm6P62313 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.03■□□□□ -0
Lsm6P62313 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lsm6P62313 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Lsm6P62313 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lsm6P62313 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.03■□□□□ -0
Lsm6P62313 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.03■□□□□ -0
Lsm6P62313 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.03■□□□□ -0
Lsm6P62313 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Lsm6P62313 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Lsm6P62313 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.03■□□□□ -0
Lsm6P62313 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.03■□□□□ -0
Lsm6P62313 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.03■□□□□ -0
Lsm6P62313 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Lsm6P62313 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.03■□□□□ -0
Lsm6P62313 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Lsm6P62313 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Lsm6P62313 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lsm6P62313 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Lsm6P62313 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lsm6P62313 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.03■□□□□ -0
Lsm6P62313 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lsm6P62313 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Lsm6P62313 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Lsm6P62313 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lsm6P62313 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lsm6P62313 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.02■□□□□ -0
Lsm6P62313 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lsm6P62313 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Lsm6P62313 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lsm6P62313 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lsm6P62313 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lsm6P62313 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lsm6P62313 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.02■□□□□ -0
Lsm6P62313 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.02■□□□□ -0
Lsm6P62313 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.02■□□□□ -0
Lsm6P62313 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lsm6P62313 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lsm6P62313 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Lsm6P62313 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lsm6P62313 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Lsm6P62313 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Lsm6P62313 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lsm6P62313 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lsm6P62313 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lsm6P62313 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm6P62313 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm6P62313 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm6P62313 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm6P62313 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Lsm6P62313 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.01□□□□□ -0.01
Lsm6P62313 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.01□□□□□ -0.01
Lsm6P62313 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm6P62313 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm6P62313 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm6P62313 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Lsm6P62313 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm6P62313 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm6P62313 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Lsm6P62313 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Lsm6P62313 Gm45412-201ENSMUST00000210217 2275 ntBASIC15□□□□□ -0.01
Lsm6P62313 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Lsm6P62313 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15□□□□□ -0.01
Lsm6P62313 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Lsm6P62313 Mir1199-201ENSMUST00000117015 119 ntBASIC15□□□□□ -0.01
Lsm6P62313 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15□□□□□ -0.01
Lsm6P62313 AC153881.1-201ENSMUST00000214448 284 ntBASIC15□□□□□ -0.01
Lsm6P62313 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Lsm6P62313 Gm16401-202ENSMUST00000197463 2074 ntBASIC15□□□□□ -0.01
Lsm6P62313 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Lsm6P62313 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15□□□□□ -0.01
Lsm6P62313 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Lsm6P62313 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Lsm6P62313 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Lsm6P62313 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Lsm6P62313 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Lsm6P62313 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Lsm6P62313 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15□□□□□ -0.01
Lsm6P62313 Gm16499-203ENSMUST00000204633 2177 ntBASIC15□□□□□ -0.01
Lsm6P62313 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Lsm6P62313 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm6P62313 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.99□□□□□ -0.01
Lsm6P62313 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm6P62313 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Lsm6P62313 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm6P62313 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm6P62313 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm6P62313 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm6P62313 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm6P62313 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms