Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cks1bP61025 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cks1bP61025 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC12.26□□□□□ -0.45
Cks1bP61025 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC12.26□□□□□ -0.45
Cks1bP61025 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cks1bP61025 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cks1bP61025 Gm38308-201ENSMUST00000194934 1809 ntBASIC12.26□□□□□ -0.45
Cks1bP61025 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC12.26□□□□□ -0.45
Cks1bP61025 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cks1bP61025 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cks1bP61025 Wdr70-203ENSMUST00000227371 1130 ntBASIC12.26□□□□□ -0.45
Cks1bP61025 Gm13241-201ENSMUST00000094493 780 ntBASIC12.26□□□□□ -0.45
Cks1bP61025 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cks1bP61025 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cks1bP61025 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cks1bP61025 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.26□□□□□ -0.45
Cks1bP61025 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cks1bP61025 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cks1bP61025 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cks1bP61025 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cks1bP61025 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cks1bP61025 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1bP61025 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1bP61025 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1bP61025 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1bP61025 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.25□□□□□ -0.45
Cks1bP61025 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1bP61025 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cks1bP61025 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1bP61025 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1bP61025 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cks1bP61025 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1bP61025 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1bP61025 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1bP61025 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC12.25□□□□□ -0.45
Cks1bP61025 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC12.25□□□□□ -0.45
Cks1bP61025 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1bP61025 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC12.25□□□□□ -0.45
Cks1bP61025 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1bP61025 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC12.25□□□□□ -0.45
Cks1bP61025 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cks1bP61025 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cks1bP61025 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1bP61025 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1bP61025 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1bP61025 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1bP61025 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1bP61025 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1bP61025 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1bP61025 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1bP61025 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1bP61025 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1bP61025 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cks1bP61025 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Cks1bP61025 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1bP61025 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1bP61025 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.24□□□□□ -0.45
Cks1bP61025 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cks1bP61025 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Cks1bP61025 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cks1bP61025 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cks1bP61025 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cks1bP61025 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Cks1bP61025 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cks1bP61025 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Cks1bP61025 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cks1bP61025 CT030146.1-201ENSMUST00000220919 217 ntBASIC12.24□□□□□ -0.45
Cks1bP61025 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC12.24□□□□□ -0.45
Cks1bP61025 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cks1bP61025 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cks1bP61025 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cks1bP61025 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cks1bP61025 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cks1bP61025 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cks1bP61025 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cks1bP61025 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cks1bP61025 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cks1bP61025 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cks1bP61025 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cks1bP61025 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cks1bP61025 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cks1bP61025 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cks1bP61025 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cks1bP61025 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC12.23□□□□□ -0.45
Cks1bP61025 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cks1bP61025 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cks1bP61025 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cks1bP61025 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cks1bP61025 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cks1bP61025 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cks1bP61025 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cks1bP61025 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cks1bP61025 Zcchc6-207ENSMUST00000225576 2499 ntBASIC12.23□□□□□ -0.45
Cks1bP61025 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cks1bP61025 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cks1bP61025 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Cks1bP61025 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cks1bP61025 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cks1bP61025 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cks1bP61025 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms