Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tpm1P58771 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tpm1P58771 Gm5421-201ENSMUST00000181698 2354 ntBASIC19.17■□□□□ 0.66
Tpm1P58771 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tpm1P58771 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Tpm1P58771 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.17■□□□□ 0.66
Tpm1P58771 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tpm1P58771 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tpm1P58771 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Tpm1P58771 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tpm1P58771 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tpm1P58771 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tpm1P58771 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tpm1P58771 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tpm1P58771 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.16■□□□□ 0.66
Tpm1P58771 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tpm1P58771 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tpm1P58771 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tpm1P58771 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Tpm1P58771 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tpm1P58771 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tpm1P58771 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tpm1P58771 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tpm1P58771 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm1P58771 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm1P58771 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm1P58771 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm1P58771 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm1P58771 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm1P58771 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm1P58771 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm1P58771 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm1P58771 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm1P58771 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm1P58771 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm1P58771 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.15■□□□□ 0.66
Tpm1P58771 Gm18671-201ENSMUST00000214826 683 ntBASIC19.15■□□□□ 0.66
Tpm1P58771 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm1P58771 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm1P58771 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm1P58771 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm1P58771 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm1P58771 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm1P58771 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.15■□□□□ 0.66
Tpm1P58771 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm1P58771 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm1P58771 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm1P58771 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Tpm1P58771 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tpm1P58771 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.14■□□□□ 0.65
Tpm1P58771 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tpm1P58771 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tpm1P58771 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.14■□□□□ 0.65
Tpm1P58771 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tpm1P58771 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tpm1P58771 Gm26917-202ENSMUST00000192833 3329 ntBASIC19.14■□□□□ 0.65
Tpm1P58771 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.14■□□□□ 0.65
Tpm1P58771 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
Tpm1P58771 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tpm1P58771 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tpm1P58771 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tpm1P58771 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Tpm1P58771 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tpm1P58771 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Tpm1P58771 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tpm1P58771 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Tpm1P58771 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tpm1P58771 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tpm1P58771 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tpm1P58771 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Tpm1P58771 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.13■□□□□ 0.65
Tpm1P58771 Gm38285-201ENSMUST00000192928 922 ntBASIC19.13■□□□□ 0.65
Tpm1P58771 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.13■□□□□ 0.65
Tpm1P58771 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.13■□□□□ 0.65
Tpm1P58771 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tpm1P58771 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tpm1P58771 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Tpm1P58771 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tpm1P58771 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tpm1P58771 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tpm1P58771 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tpm1P58771 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Tpm1P58771 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tpm1P58771 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tpm1P58771 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Tpm1P58771 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.12■□□□□ 0.65
Tpm1P58771 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
Tpm1P58771 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tpm1P58771 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tpm1P58771 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tpm1P58771 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
Tpm1P58771 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tpm1P58771 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.12■□□□□ 0.65
Tpm1P58771 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tpm1P58771 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tpm1P58771 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tpm1P58771 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Tpm1P58771 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.12■□□□□ 0.65
Tpm1P58771 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Tpm1P58771 Mir8112-201ENSMUST00000184382 131 ntBASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms