Protein–RNA interactions for Protein: P56716

Rp1, Oxygen-regulated protein 1, mousemouse

Predictions only

Length 2,095 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1P56716 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rp1P56716 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rp1P56716 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rp1P56716 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Rp1P56716 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.45■□□□□ 0.38
Rp1P56716 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Rp1P56716 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.45■□□□□ 0.38
Rp1P56716 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rp1P56716 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.45■□□□□ 0.38
Rp1P56716 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rp1P56716 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rp1P56716 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rp1P56716 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rp1P56716 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rp1P56716 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.44■□□□□ 0.38
Rp1P56716 Gm43347-201ENSMUST00000200226 580 ntBASIC17.44■□□□□ 0.38
Rp1P56716 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rp1P56716 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rp1P56716 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rp1P56716 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rp1P56716 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rp1P56716 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Rp1P56716 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rp1P56716 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rp1P56716 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rp1P56716 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.44■□□□□ 0.38
Rp1P56716 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.44■□□□□ 0.38
Rp1P56716 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Rp1P56716 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rp1P56716 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.44■□□□□ 0.38
Rp1P56716 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rp1P56716 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rp1P56716 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rp1P56716 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rp1P56716 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rp1P56716 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rp1P56716 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rp1P56716 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.43■□□□□ 0.38
Rp1P56716 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.43■□□□□ 0.38
Rp1P56716 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.43■□□□□ 0.38
Rp1P56716 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.43■□□□□ 0.38
Rp1P56716 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rp1P56716 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rp1P56716 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rp1P56716 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rp1P56716 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rp1P56716 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rp1P56716 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rp1P56716 Gm28659-201ENSMUST00000188013 759 ntBASIC17.43■□□□□ 0.38
Rp1P56716 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rp1P56716 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rp1P56716 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Rp1P56716 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rp1P56716 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Rp1P56716 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rp1P56716 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rp1P56716 Gm10052-201ENSMUST00000168019 960 ntBASIC17.42■□□□□ 0.38
Rp1P56716 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.42■□□□□ 0.38
Rp1P56716 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rp1P56716 Gm7729-201ENSMUST00000050143 801 ntBASIC17.42■□□□□ 0.38
Rp1P56716 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rp1P56716 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rp1P56716 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rp1P56716 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rp1P56716 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Rp1P56716 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.41■□□□□ 0.38
Rp1P56716 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.41■□□□□ 0.38
Rp1P56716 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rp1P56716 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Rp1P56716 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Rp1P56716 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.41■□□□□ 0.38
Rp1P56716 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rp1P56716 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rp1P56716 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rp1P56716 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rp1P56716 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rp1P56716 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rp1P56716 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.41■□□□□ 0.38
Rp1P56716 Gm12895-201ENSMUST00000122214 226 ntBASIC17.41■□□□□ 0.38
Rp1P56716 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.41■□□□□ 0.38
Rp1P56716 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.41■□□□□ 0.38
Rp1P56716 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rp1P56716 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rp1P56716 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rp1P56716 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rp1P56716 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.4■□□□□ 0.38
Rp1P56716 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rp1P56716 Rprl3-201ENSMUST00000157400 290 ntBASIC17.4■□□□□ 0.38
Rp1P56716 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rp1P56716 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rp1P56716 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.4■□□□□ 0.38
Rp1P56716 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Rp1P56716 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rp1P56716 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rp1P56716 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.39■□□□□ 0.37
Rp1P56716 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rp1P56716 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rp1P56716 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rp1P56716 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rp1P56716 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms