Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lim2P56563 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lim2P56563 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.17■□□□□ 0.34
Lim2P56563 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.17■□□□□ 0.34
Lim2P56563 Mir7071-201ENSMUST00000184847 69 ntBASIC17.17■□□□□ 0.34
Lim2P56563 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.17■□□□□ 0.34
Lim2P56563 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lim2P56563 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lim2P56563 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lim2P56563 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lim2P56563 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Lim2P56563 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Lim2P56563 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lim2P56563 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lim2P56563 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Lim2P56563 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Lim2P56563 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lim2P56563 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.16■□□□□ 0.34
Lim2P56563 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Lim2P56563 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lim2P56563 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lim2P56563 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Lim2P56563 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.16■□□□□ 0.34
Lim2P56563 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Lim2P56563 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Lim2P56563 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lim2P56563 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.16■□□□□ 0.34
Lim2P56563 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lim2P56563 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lim2P56563 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lim2P56563 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lim2P56563 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lim2P56563 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lim2P56563 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lim2P56563 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.15■□□□□ 0.34
Lim2P56563 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lim2P56563 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lim2P56563 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lim2P56563 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lim2P56563 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lim2P56563 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Lim2P56563 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Lim2P56563 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lim2P56563 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lim2P56563 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Lim2P56563 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.15■□□□□ 0.34
Lim2P56563 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lim2P56563 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Lim2P56563 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.15■□□□□ 0.34
Lim2P56563 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lim2P56563 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lim2P56563 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Lim2P56563 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Lim2P56563 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Lim2P56563 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lim2P56563 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lim2P56563 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Lim2P56563 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.14■□□□□ 0.33
Lim2P56563 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lim2P56563 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lim2P56563 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Lim2P56563 Gm43799-201ENSMUST00000201845 579 ntBASIC17.14■□□□□ 0.33
Lim2P56563 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.14■□□□□ 0.33
Lim2P56563 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.14■□□□□ 0.33
Lim2P56563 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.14■□□□□ 0.33
Lim2P56563 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lim2P56563 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lim2P56563 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Lim2P56563 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lim2P56563 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.13■□□□□ 0.33
Lim2P56563 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lim2P56563 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lim2P56563 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.13■□□□□ 0.33
Lim2P56563 Gm11539-201ENSMUST00000119837 557 ntBASIC17.13■□□□□ 0.33
Lim2P56563 Gm13436-201ENSMUST00000120418 567 ntBASIC17.13■□□□□ 0.33
Lim2P56563 Gm7638-201ENSMUST00000121348 967 ntBASIC17.13■□□□□ 0.33
Lim2P56563 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lim2P56563 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lim2P56563 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lim2P56563 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lim2P56563 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lim2P56563 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lim2P56563 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lim2P56563 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lim2P56563 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.13■□□□□ 0.33
Lim2P56563 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lim2P56563 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lim2P56563 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lim2P56563 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.12■□□□□ 0.33
Lim2P56563 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lim2P56563 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.12■□□□□ 0.33
Lim2P56563 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lim2P56563 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lim2P56563 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Lim2P56563 Gm27463-201ENSMUST00000183569 57 ntBASIC17.12■□□□□ 0.33
Lim2P56563 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.12■□□□□ 0.33
Lim2P56563 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lim2P56563 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.12■□□□□ 0.33
Lim2P56563 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lim2P56563 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms