Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Irf5P56477 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Irf5P56477 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Irf5P56477 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.3■□□□□ 0.84
Irf5P56477 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Irf5P56477 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Irf5P56477 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Irf5P56477 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Irf5P56477 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC20.29■□□□□ 0.84
Irf5P56477 Gm25016-201ENSMUST00000158399 131 ntBASIC20.29■□□□□ 0.84
Irf5P56477 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Irf5P56477 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Irf5P56477 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Irf5P56477 Gm20628-201ENSMUST00000177363 3215 ntBASIC20.29■□□□□ 0.84
Irf5P56477 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Irf5P56477 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Irf5P56477 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Irf5P56477 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Irf5P56477 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Irf5P56477 AC154471.1-201ENSMUST00000224418 436 ntBASIC20.28■□□□□ 0.84
Irf5P56477 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Irf5P56477 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Irf5P56477 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Irf5P56477 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Irf5P56477 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Irf5P56477 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Irf5P56477 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Irf5P56477 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Irf5P56477 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Irf5P56477 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.27■□□□□ 0.84
Irf5P56477 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Irf5P56477 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC20.27■□□□□ 0.84
Irf5P56477 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Irf5P56477 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Irf5P56477 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Irf5P56477 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Irf5P56477 Gm16061-201ENSMUST00000122167 857 ntBASIC20.27■□□□□ 0.84
Irf5P56477 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Irf5P56477 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.27■□□□□ 0.84
Irf5P56477 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Irf5P56477 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Irf5P56477 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Irf5P56477 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Irf5P56477 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Irf5P56477 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Irf5P56477 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Irf5P56477 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Irf5P56477 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.26■□□□□ 0.83
Irf5P56477 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.26■□□□□ 0.83
Irf5P56477 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Irf5P56477 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Irf5P56477 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.26■□□□□ 0.83
Irf5P56477 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Irf5P56477 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Irf5P56477 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Irf5P56477 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Irf5P56477 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.26■□□□□ 0.83
Irf5P56477 Gm13474-201ENSMUST00000122466 815 ntBASIC20.26■□□□□ 0.83
Irf5P56477 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Irf5P56477 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Irf5P56477 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Irf5P56477 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.26■□□□□ 0.83
Irf5P56477 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Irf5P56477 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Irf5P56477 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Irf5P56477 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Irf5P56477 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Irf5P56477 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Irf5P56477 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Irf5P56477 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Irf5P56477 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Irf5P56477 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Irf5P56477 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Irf5P56477 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Irf5P56477 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Irf5P56477 Gm17661-201ENSMUST00000170317 270 ntBASIC20.25■□□□□ 0.83
Irf5P56477 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Irf5P56477 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Irf5P56477 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Irf5P56477 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Irf5P56477 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.25■□□□□ 0.83
Irf5P56477 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Irf5P56477 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Irf5P56477 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Irf5P56477 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Irf5P56477 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC20.24■□□□□ 0.83
Irf5P56477 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Irf5P56477 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Irf5P56477 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Irf5P56477 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Irf5P56477 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Irf5P56477 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Irf5P56477 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.24■□□□□ 0.83
Irf5P56477 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Irf5P56477 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Irf5P56477 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Irf5P56477 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Irf5P56477 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Irf5P56477 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Irf5P56477 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms