Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.37■□□□□ 0.69
Rrp1P56183 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.37■□□□□ 0.69
Rrp1P56183 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Rrp1P56183 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rrp1P56183 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Rrp1P56183 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rrp1P56183 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rrp1P56183 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rrp1P56183 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rrp1P56183 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Rrp1P56183 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rrp1P56183 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rrp1P56183 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rrp1P56183 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rrp1P56183 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rrp1P56183 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Rrp1P56183 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rrp1P56183 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rrp1P56183 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rrp1P56183 Gm2559-201ENSMUST00000201323 363 ntBASIC19.36■□□□□ 0.69
Rrp1P56183 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rrp1P56183 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rrp1P56183 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rrp1P56183 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rrp1P56183 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rrp1P56183 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rrp1P56183 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rrp1P56183 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Rrp1P56183 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rrp1P56183 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rrp1P56183 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rrp1P56183 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rrp1P56183 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rrp1P56183 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Rrp1P56183 Gm20628-201ENSMUST00000177363 3215 ntBASIC19.35■□□□□ 0.69
Rrp1P56183 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rrp1P56183 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rrp1P56183 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.35■□□□□ 0.69
Rrp1P56183 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Rrp1P56183 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.35■□□□□ 0.69
Rrp1P56183 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rrp1P56183 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rrp1P56183 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rrp1P56183 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rrp1P56183 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rrp1P56183 Dio3-201ENSMUST00000097228 1449 ntBASIC19.34■□□□□ 0.69
Rrp1P56183 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rrp1P56183 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rrp1P56183 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.34■□□□□ 0.69
Rrp1P56183 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rrp1P56183 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rrp1P56183 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rrp1P56183 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.34■□□□□ 0.69
Rrp1P56183 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.34■□□□□ 0.69
Rrp1P56183 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.34■□□□□ 0.69
Rrp1P56183 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Rrp1P56183 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rrp1P56183 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rrp1P56183 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rrp1P56183 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rrp1P56183 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rrp1P56183 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rrp1P56183 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rrp1P56183 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rrp1P56183 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rrp1P56183 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rrp1P56183 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
Rrp1P56183 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.33■□□□□ 0.68
Rrp1P56183 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Rrp1P56183 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rrp1P56183 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC19.33■□□□□ 0.68
Rrp1P56183 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Rrp1P56183 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rrp1P56183 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Rrp1P56183 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rrp1P56183 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rrp1P56183 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rrp1P56183 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rrp1P56183 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rrp1P56183 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.32■□□□□ 0.68
Rrp1P56183 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.32■□□□□ 0.68
Rrp1P56183 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.32■□□□□ 0.68
Rrp1P56183 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rrp1P56183 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.32■□□□□ 0.68
Rrp1P56183 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Rrp1P56183 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rrp1P56183 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.32■□□□□ 0.68
Rrp1P56183 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.32■□□□□ 0.68
Rrp1P56183 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rrp1P56183 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Rrp1P56183 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rrp1P56183 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rrp1P56183 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rrp1P56183 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rrp1P56183 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Rrp1P56183 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rrp1P56183 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rrp1P56183 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rrp1P56183 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rrp1P56183 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms