Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Nub1P54729 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.45■□□□□ 0.54
Nub1P54729 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nub1P54729 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.45■□□□□ 0.54
Nub1P54729 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nub1P54729 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nub1P54729 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nub1P54729 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nub1P54729 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nub1P54729 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nub1P54729 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.45■□□□□ 0.54
Nub1P54729 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Nub1P54729 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nub1P54729 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nub1P54729 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nub1P54729 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Nub1P54729 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nub1P54729 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Nub1P54729 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nub1P54729 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nub1P54729 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Nub1P54729 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.44■□□□□ 0.54
Nub1P54729 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nub1P54729 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nub1P54729 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.44■□□□□ 0.54
Nub1P54729 Gm37055-201ENSMUST00000191866 133 ntBASIC18.44■□□□□ 0.54
Nub1P54729 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nub1P54729 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.44■□□□□ 0.54
Nub1P54729 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nub1P54729 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Nub1P54729 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Nub1P54729 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nub1P54729 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nub1P54729 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nub1P54729 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nub1P54729 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nub1P54729 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nub1P54729 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nub1P54729 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nub1P54729 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nub1P54729 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nub1P54729 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nub1P54729 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nub1P54729 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nub1P54729 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nub1P54729 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nub1P54729 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Nub1P54729 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.43■□□□□ 0.54
Nub1P54729 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Nub1P54729 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.43■□□□□ 0.54
Nub1P54729 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.43■□□□□ 0.54
Nub1P54729 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Nub1P54729 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nub1P54729 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.43■□□□□ 0.54
Nub1P54729 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Nub1P54729 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nub1P54729 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nub1P54729 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nub1P54729 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nub1P54729 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Nub1P54729 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Nub1P54729 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nub1P54729 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.42■□□□□ 0.54
Nub1P54729 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Nub1P54729 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nub1P54729 Gm5417-201ENSMUST00000079706 384 ntBASIC18.42■□□□□ 0.54
Nub1P54729 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nub1P54729 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nub1P54729 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nub1P54729 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nub1P54729 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nub1P54729 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nub1P54729 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nub1P54729 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nub1P54729 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nub1P54729 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nub1P54729 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nub1P54729 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nub1P54729 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.41■□□□□ 0.54
Nub1P54729 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nub1P54729 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nub1P54729 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Nub1P54729 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nub1P54729 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.41■□□□□ 0.54
Nub1P54729 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nub1P54729 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nub1P54729 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Nub1P54729 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Nub1P54729 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nub1P54729 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nub1P54729 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nub1P54729 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Nub1P54729 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nub1P54729 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Nub1P54729 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nub1P54729 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nub1P54729 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nub1P54729 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nub1P54729 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nub1P54729 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms