Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lhx4P53776 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.52□□□□□ -0.09
Lhx4P53776 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Lhx4P53776 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lhx4P53776 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Lhx4P53776 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lhx4P53776 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lhx4P53776 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lhx4P53776 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Lhx4P53776 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Lhx4P53776 Mir6349-201ENSMUST00000184059 97 ntBASIC14.51□□□□□ -0.09
Lhx4P53776 Gm42545-201ENSMUST00000202755 922 ntBASIC14.51□□□□□ -0.09
Lhx4P53776 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lhx4P53776 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Lhx4P53776 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lhx4P53776 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lhx4P53776 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Lhx4P53776 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lhx4P53776 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lhx4P53776 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Lhx4P53776 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.51□□□□□ -0.09
Lhx4P53776 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Lhx4P53776 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.51□□□□□ -0.09
Lhx4P53776 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lhx4P53776 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lhx4P53776 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lhx4P53776 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.51□□□□□ -0.09
Lhx4P53776 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lhx4P53776 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lhx4P53776 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lhx4P53776 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lhx4P53776 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lhx4P53776 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lhx4P53776 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.5□□□□□ -0.09
Lhx4P53776 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lhx4P53776 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lhx4P53776 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lhx4P53776 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lhx4P53776 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lhx4P53776 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Lhx4P53776 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.5□□□□□ -0.09
Lhx4P53776 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lhx4P53776 Mir1199-201ENSMUST00000117015 119 ntBASIC14.5□□□□□ -0.09
Lhx4P53776 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Lhx4P53776 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.5□□□□□ -0.09
Lhx4P53776 Gm29791-202ENSMUST00000207888 369 ntBASIC14.5□□□□□ -0.09
Lhx4P53776 Gm18025-201ENSMUST00000221733 862 ntBASIC14.5□□□□□ -0.09
Lhx4P53776 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lhx4P53776 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lhx4P53776 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lhx4P53776 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lhx4P53776 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lhx4P53776 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lhx4P53776 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lhx4P53776 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lhx4P53776 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lhx4P53776 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lhx4P53776 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lhx4P53776 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lhx4P53776 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lhx4P53776 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Lhx4P53776 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.5□□□□□ -0.09
Lhx4P53776 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lhx4P53776 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lhx4P53776 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lhx4P53776 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lhx4P53776 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lhx4P53776 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lhx4P53776 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lhx4P53776 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Lhx4P53776 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.49□□□□□ -0.09
Lhx4P53776 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.49□□□□□ -0.09
Lhx4P53776 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.49□□□□□ -0.09
Lhx4P53776 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lhx4P53776 Gm43183-201ENSMUST00000200632 547 ntBASIC14.49□□□□□ -0.09
Lhx4P53776 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.49□□□□□ -0.09
Lhx4P53776 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Lhx4P53776 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lhx4P53776 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Lhx4P53776 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lhx4P53776 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lhx4P53776 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lhx4P53776 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Lhx4P53776 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.49□□□□□ -0.09
Lhx4P53776 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lhx4P53776 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx4P53776 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx4P53776 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx4P53776 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx4P53776 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Lhx4P53776 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx4P53776 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx4P53776 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx4P53776 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx4P53776 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.48□□□□□ -0.09
Lhx4P53776 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx4P53776 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx4P53776 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.48□□□□□ -0.09
Lhx4P53776 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx4P53776 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms