Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.3■□□□□ 0.68
Brca1P48754 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Brca1P48754 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Brca1P48754 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Brca1P48754 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Brca1P48754 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Brca1P48754 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Brca1P48754 Gm4995-201ENSMUST00000117247 432 ntBASIC19.29■□□□□ 0.68
Brca1P48754 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC19.29■□□□□ 0.68
Brca1P48754 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC19.29■□□□□ 0.68
Brca1P48754 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC19.29■□□□□ 0.68
Brca1P48754 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Brca1P48754 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Brca1P48754 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Brca1P48754 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Brca1P48754 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Brca1P48754 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.28■□□□□ 0.68
Brca1P48754 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Brca1P48754 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Brca1P48754 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Brca1P48754 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Brca1P48754 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC19.28■□□□□ 0.68
Brca1P48754 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Brca1P48754 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.28■□□□□ 0.68
Brca1P48754 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Brca1P48754 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Brca1P48754 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Brca1P48754 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Brca1P48754 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC19.28■□□□□ 0.68
Brca1P48754 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.27■□□□□ 0.68
Brca1P48754 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.27■□□□□ 0.68
Brca1P48754 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.27■□□□□ 0.68
Brca1P48754 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Brca1P48754 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
Brca1P48754 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.27■□□□□ 0.68
Brca1P48754 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Brca1P48754 Gm10060-201ENSMUST00000212002 111 ntBASIC19.27■□□□□ 0.68
Brca1P48754 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Brca1P48754 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Brca1P48754 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Brca1P48754 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Brca1P48754 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Brca1P48754 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Brca1P48754 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.27■□□□□ 0.67
Brca1P48754 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Brca1P48754 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19.26■□□□□ 0.67
Brca1P48754 Rprl3-201ENSMUST00000157400 290 ntBASIC19.26■□□□□ 0.67
Brca1P48754 Gm5364-201ENSMUST00000216789 889 ntBASIC19.26■□□□□ 0.67
Brca1P48754 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.26■□□□□ 0.67
Brca1P48754 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Brca1P48754 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Brca1P48754 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Brca1P48754 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Brca1P48754 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Brca1P48754 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.25■□□□□ 0.67
Brca1P48754 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Brca1P48754 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Brca1P48754 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Brca1P48754 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Brca1P48754 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Brca1P48754 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Brca1P48754 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Brca1P48754 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Brca1P48754 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Brca1P48754 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Brca1P48754 Gm43332-201ENSMUST00000202511 1044 ntBASIC19.25■□□□□ 0.67
Brca1P48754 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Brca1P48754 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.25■□□□□ 0.67
Brca1P48754 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Brca1P48754 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Brca1P48754 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Brca1P48754 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Brca1P48754 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC19.25■□□□□ 0.67
Brca1P48754 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Brca1P48754 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Brca1P48754 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Brca1P48754 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Brca1P48754 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.24■□□□□ 0.67
Brca1P48754 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Brca1P48754 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Brca1P48754 AC159093.1-201ENSMUST00000227779 380 ntBASIC19.24■□□□□ 0.67
Brca1P48754 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Brca1P48754 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Brca1P48754 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Brca1P48754 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Brca1P48754 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Brca1P48754 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.24■□□□□ 0.67
Brca1P48754 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.24■□□□□ 0.67
Brca1P48754 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Brca1P48754 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC19.23■□□□□ 0.67
Brca1P48754 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Brca1P48754 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Brca1P48754 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.23■□□□□ 0.67
Brca1P48754 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Brca1P48754 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Brca1P48754 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Brca1P48754 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.23■□□□□ 0.67
Brca1P48754 Gm5264-201ENSMUST00000190584 848 ntBASIC19.23■□□□□ 0.67
Brca1P48754 Gm2213-201ENSMUST00000197485 688 ntBASIC19.23■□□□□ 0.67
Brca1P48754 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms