Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cxcl12P40224 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Cxcl12P40224 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cxcl12P40224 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Cxcl12P40224 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.68■□□□□ 0.42
Cxcl12P40224 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.68■□□□□ 0.42
Cxcl12P40224 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cxcl12P40224 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cxcl12P40224 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Cxcl12P40224 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cxcl12P40224 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cxcl12P40224 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.68■□□□□ 0.42
Cxcl12P40224 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cxcl12P40224 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cxcl12P40224 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cxcl12P40224 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cxcl12P40224 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cxcl12P40224 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.68■□□□□ 0.42
Cxcl12P40224 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cxcl12P40224 Gm6736-201ENSMUST00000166583 948 ntBASIC17.67■□□□□ 0.42
Cxcl12P40224 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Cxcl12P40224 Gm10060-201ENSMUST00000212002 111 ntBASIC17.67■□□□□ 0.42
Cxcl12P40224 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.67■□□□□ 0.42
Cxcl12P40224 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cxcl12P40224 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Cxcl12P40224 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cxcl12P40224 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cxcl12P40224 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cxcl12P40224 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.66■□□□□ 0.42
Cxcl12P40224 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cxcl12P40224 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.66■□□□□ 0.42
Cxcl12P40224 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cxcl12P40224 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.66■□□□□ 0.42
Cxcl12P40224 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.66■□□□□ 0.42
Cxcl12P40224 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cxcl12P40224 Gm27702-201ENSMUST00000184512 56 ntBASIC17.66■□□□□ 0.42
Cxcl12P40224 Gm5264-201ENSMUST00000190584 848 ntBASIC17.66■□□□□ 0.42
Cxcl12P40224 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.66■□□□□ 0.42
Cxcl12P40224 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cxcl12P40224 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cxcl12P40224 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.66■□□□□ 0.42
Cxcl12P40224 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cxcl12P40224 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cxcl12P40224 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cxcl12P40224 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cxcl12P40224 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.66■□□□□ 0.42
Cxcl12P40224 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Cxcl12P40224 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cxcl12P40224 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cxcl12P40224 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cxcl12P40224 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cxcl12P40224 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cxcl12P40224 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Cxcl12P40224 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cxcl12P40224 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cxcl12P40224 Gm13186-201ENSMUST00000118031 316 ntBASIC17.65■□□□□ 0.42
Cxcl12P40224 Gm12350-201ENSMUST00000121208 462 ntBASIC17.65■□□□□ 0.42
Cxcl12P40224 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.65■□□□□ 0.42
Cxcl12P40224 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cxcl12P40224 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cxcl12P40224 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cxcl12P40224 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cxcl12P40224 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cxcl12P40224 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cxcl12P40224 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Cxcl12P40224 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.64■□□□□ 0.41
Cxcl12P40224 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cxcl12P40224 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cxcl12P40224 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.64■□□□□ 0.41
Cxcl12P40224 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.64■□□□□ 0.41
Cxcl12P40224 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cxcl12P40224 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.64■□□□□ 0.41
Cxcl12P40224 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.64■□□□□ 0.41
Cxcl12P40224 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cxcl12P40224 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Cxcl12P40224 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.64■□□□□ 0.41
Cxcl12P40224 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cxcl12P40224 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cxcl12P40224 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cxcl12P40224 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cxcl12P40224 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cxcl12P40224 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cxcl12P40224 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.63■□□□□ 0.41
Cxcl12P40224 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cxcl12P40224 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cxcl12P40224 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cxcl12P40224 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cxcl12P40224 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cxcl12P40224 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
Cxcl12P40224 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cxcl12P40224 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.63■□□□□ 0.41
Cxcl12P40224 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cxcl12P40224 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cxcl12P40224 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cxcl12P40224 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.63■□□□□ 0.41
Cxcl12P40224 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cxcl12P40224 Gm13312-201ENSMUST00000119631 718 ntBASIC17.63■□□□□ 0.41
Cxcl12P40224 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.63■□□□□ 0.41
Cxcl12P40224 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.63■□□□□ 0.41
Cxcl12P40224 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms