Protein–RNA interactions for Protein: P31001

Des, Desmin, mousemouse

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DesP31001 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.73■□□□□ 0.43
DesP31001 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DesP31001 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DesP31001 Gm12441-201ENSMUST00000121806 588 ntBASIC17.73■□□□□ 0.43
DesP31001 Gm13158-201ENSMUST00000122007 736 ntBASIC17.73■□□□□ 0.43
DesP31001 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
DesP31001 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DesP31001 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DesP31001 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DesP31001 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
DesP31001 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DesP31001 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DesP31001 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DesP31001 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DesP31001 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DesP31001 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
DesP31001 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
DesP31001 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DesP31001 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.72■□□□□ 0.43
DesP31001 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.72■□□□□ 0.43
DesP31001 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DesP31001 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
DesP31001 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.72■□□□□ 0.43
DesP31001 Gm11249-201ENSMUST00000117071 859 ntBASIC17.72■□□□□ 0.43
DesP31001 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.72■□□□□ 0.43
DesP31001 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DesP31001 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.72■□□□□ 0.43
DesP31001 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DesP31001 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.72■□□□□ 0.43
DesP31001 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DesP31001 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DesP31001 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DesP31001 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DesP31001 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
DesP31001 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
DesP31001 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DesP31001 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DesP31001 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DesP31001 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DesP31001 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DesP31001 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
DesP31001 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
DesP31001 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DesP31001 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DesP31001 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.71■□□□□ 0.43
DesP31001 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.71■□□□□ 0.43
DesP31001 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DesP31001 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DesP31001 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DesP31001 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
DesP31001 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
DesP31001 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
DesP31001 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
DesP31001 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DesP31001 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
DesP31001 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DesP31001 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DesP31001 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
DesP31001 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DesP31001 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
DesP31001 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DesP31001 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.7■□□□□ 0.42
DesP31001 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DesP31001 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.7■□□□□ 0.42
DesP31001 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DesP31001 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DesP31001 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DesP31001 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DesP31001 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
DesP31001 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
DesP31001 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DesP31001 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
DesP31001 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
DesP31001 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
DesP31001 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DesP31001 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.69■□□□□ 0.42
DesP31001 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DesP31001 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DesP31001 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.69■□□□□ 0.42
DesP31001 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DesP31001 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DesP31001 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
DesP31001 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
DesP31001 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.69■□□□□ 0.42
DesP31001 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
DesP31001 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DesP31001 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DesP31001 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DesP31001 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DesP31001 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DesP31001 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
DesP31001 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
DesP31001 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
DesP31001 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
DesP31001 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DesP31001 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
DesP31001 Gm20049-201ENSMUST00000219950 730 ntBASIC17.68■□□□□ 0.42
DesP31001 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.68■□□□□ 0.42
DesP31001 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DesP31001 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms