Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nfkb1P25799 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nfkb1P25799 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nfkb1P25799 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nfkb1P25799 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Nfkb1P25799 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nfkb1P25799 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.64■□□□□ 0.41
Nfkb1P25799 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nfkb1P25799 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.64■□□□□ 0.41
Nfkb1P25799 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nfkb1P25799 Mir1668-201ENSMUST00000184114 107 ntBASIC17.64■□□□□ 0.41
Nfkb1P25799 Gm7213-201ENSMUST00000215977 950 ntBASIC17.64■□□□□ 0.41
Nfkb1P25799 Gm21559-201ENSMUST00000220638 855 ntBASIC17.64■□□□□ 0.41
Nfkb1P25799 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nfkb1P25799 Gm8587-201ENSMUST00000076538 843 ntBASIC17.64■□□□□ 0.41
Nfkb1P25799 Gm10819-201ENSMUST00000099988 561 ntBASIC17.64■□□□□ 0.41
Nfkb1P25799 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nfkb1P25799 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nfkb1P25799 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nfkb1P25799 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nfkb1P25799 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nfkb1P25799 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nfkb1P25799 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nfkb1P25799 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nfkb1P25799 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Nfkb1P25799 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nfkb1P25799 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Nfkb1P25799 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Nfkb1P25799 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Nfkb1P25799 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nfkb1P25799 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nfkb1P25799 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nfkb1P25799 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Nfkb1P25799 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.63■□□□□ 0.41
Nfkb1P25799 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nfkb1P25799 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Nfkb1P25799 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nfkb1P25799 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nfkb1P25799 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nfkb1P25799 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Nfkb1P25799 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.62■□□□□ 0.41
Nfkb1P25799 Gm27389-201ENSMUST00000183622 195 ntBASIC17.62■□□□□ 0.41
Nfkb1P25799 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.62■□□□□ 0.41
Nfkb1P25799 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.62■□□□□ 0.41
Nfkb1P25799 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nfkb1P25799 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nfkb1P25799 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nfkb1P25799 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nfkb1P25799 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.62■□□□□ 0.41
Nfkb1P25799 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nfkb1P25799 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nfkb1P25799 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nfkb1P25799 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nfkb1P25799 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nfkb1P25799 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nfkb1P25799 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Nfkb1P25799 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.61■□□□□ 0.41
Nfkb1P25799 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.61■□□□□ 0.41
Nfkb1P25799 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
Nfkb1P25799 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Nfkb1P25799 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nfkb1P25799 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.61■□□□□ 0.41
Nfkb1P25799 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Nfkb1P25799 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nfkb1P25799 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Nfkb1P25799 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nfkb1P25799 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.6■□□□□ 0.41
Nfkb1P25799 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Nfkb1P25799 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nfkb1P25799 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nfkb1P25799 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Nfkb1P25799 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Nfkb1P25799 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nfkb1P25799 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nfkb1P25799 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nfkb1P25799 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.6■□□□□ 0.41
Nfkb1P25799 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nfkb1P25799 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Nfkb1P25799 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nfkb1P25799 Gm33142-201ENSMUST00000193913 867 ntBASIC17.6■□□□□ 0.41
Nfkb1P25799 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.6■□□□□ 0.41
Nfkb1P25799 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Nfkb1P25799 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nfkb1P25799 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nfkb1P25799 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nfkb1P25799 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Nfkb1P25799 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Nfkb1P25799 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.6■□□□□ 0.41
Nfkb1P25799 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nfkb1P25799 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nfkb1P25799 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nfkb1P25799 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nfkb1P25799 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nfkb1P25799 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.59■□□□□ 0.41
Nfkb1P25799 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nfkb1P25799 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nfkb1P25799 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nfkb1P25799 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nfkb1P25799 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nfkb1P25799 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms