Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Aldh1a1P24549 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Aldh1a1P24549 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Aldh1a1P24549 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Aldh1a1P24549 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Aldh1a1P24549 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Aldh1a1P24549 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Aldh1a1P24549 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.37■□□□□ 0.53
Aldh1a1P24549 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Aldh1a1P24549 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Aldh1a1P24549 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.37■□□□□ 0.53
Aldh1a1P24549 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Aldh1a1P24549 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Aldh1a1P24549 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.37■□□□□ 0.53
Aldh1a1P24549 Gm37935-201ENSMUST00000192012 982 ntBASIC18.37■□□□□ 0.53
Aldh1a1P24549 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.37■□□□□ 0.53
Aldh1a1P24549 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Aldh1a1P24549 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Aldh1a1P24549 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Aldh1a1P24549 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Aldh1a1P24549 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Aldh1a1P24549 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Aldh1a1P24549 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Aldh1a1P24549 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Aldh1a1P24549 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.37■□□□□ 0.53
Aldh1a1P24549 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Aldh1a1P24549 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Aldh1a1P24549 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Aldh1a1P24549 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Aldh1a1P24549 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Aldh1a1P24549 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Aldh1a1P24549 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Aldh1a1P24549 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Aldh1a1P24549 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Aldh1a1P24549 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Aldh1a1P24549 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Aldh1a1P24549 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Aldh1a1P24549 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Aldh1a1P24549 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Aldh1a1P24549 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Aldh1a1P24549 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Aldh1a1P24549 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Aldh1a1P24549 Gm43073-201ENSMUST00000198200 1189 ntBASIC18.36■□□□□ 0.53
Aldh1a1P24549 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Aldh1a1P24549 Rps4l-201ENSMUST00000071745 943 ntBASIC18.36■□□□□ 0.53
Aldh1a1P24549 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Aldh1a1P24549 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Aldh1a1P24549 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Aldh1a1P24549 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Aldh1a1P24549 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Aldh1a1P24549 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Aldh1a1P24549 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.35■□□□□ 0.53
Aldh1a1P24549 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Aldh1a1P24549 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Aldh1a1P24549 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Aldh1a1P24549 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Aldh1a1P24549 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Aldh1a1P24549 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Aldh1a1P24549 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.34■□□□□ 0.53
Aldh1a1P24549 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.34■□□□□ 0.53
Aldh1a1P24549 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Aldh1a1P24549 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Aldh1a1P24549 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Aldh1a1P24549 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.34■□□□□ 0.53
Aldh1a1P24549 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.34■□□□□ 0.53
Aldh1a1P24549 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Aldh1a1P24549 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Aldh1a1P24549 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Aldh1a1P24549 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Aldh1a1P24549 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Aldh1a1P24549 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Aldh1a1P24549 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
Aldh1a1P24549 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Aldh1a1P24549 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.34■□□□□ 0.53
Aldh1a1P24549 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Aldh1a1P24549 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Aldh1a1P24549 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Aldh1a1P24549 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Aldh1a1P24549 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Aldh1a1P24549 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Aldh1a1P24549 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.33■□□□□ 0.52
Aldh1a1P24549 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Aldh1a1P24549 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Aldh1a1P24549 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.33■□□□□ 0.52
Aldh1a1P24549 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Aldh1a1P24549 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Aldh1a1P24549 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Aldh1a1P24549 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Aldh1a1P24549 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Aldh1a1P24549 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Aldh1a1P24549 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Aldh1a1P24549 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Aldh1a1P24549 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Aldh1a1P24549 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.32■□□□□ 0.52
Aldh1a1P24549 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.32■□□□□ 0.52
Aldh1a1P24549 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Aldh1a1P24549 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.32■□□□□ 0.52
Aldh1a1P24549 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Aldh1a1P24549 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.32■□□□□ 0.52
Aldh1a1P24549 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms