Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cbx3P23198 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cbx3P23198 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cbx3P23198 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cbx3P23198 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cbx3P23198 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cbx3P23198 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.66■□□□□ 0.1
Cbx3P23198 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cbx3P23198 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.66■□□□□ 0.1
Cbx3P23198 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cbx3P23198 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cbx3P23198 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cbx3P23198 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cbx3P23198 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cbx3P23198 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cbx3P23198 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cbx3P23198 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cbx3P23198 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cbx3P23198 Serp2-204ENSMUST00000228055 705 ntBASIC15.66■□□□□ 0.1
Cbx3P23198 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cbx3P23198 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cbx3P23198 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.66■□□□□ 0.1
Cbx3P23198 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cbx3P23198 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cbx3P23198 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
Cbx3P23198 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cbx3P23198 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cbx3P23198 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cbx3P23198 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cbx3P23198 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Cbx3P23198 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cbx3P23198 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cbx3P23198 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cbx3P23198 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.65■□□□□ 0.1
Cbx3P23198 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Cbx3P23198 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cbx3P23198 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cbx3P23198 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Cbx3P23198 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cbx3P23198 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cbx3P23198 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cbx3P23198 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cbx3P23198 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cbx3P23198 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.64■□□□□ 0.09
Cbx3P23198 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cbx3P23198 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Cbx3P23198 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cbx3P23198 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cbx3P23198 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cbx3P23198 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cbx3P23198 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cbx3P23198 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cbx3P23198 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cbx3P23198 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cbx3P23198 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC15.64■□□□□ 0.09
Cbx3P23198 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.64■□□□□ 0.09
Cbx3P23198 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cbx3P23198 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cbx3P23198 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.64■□□□□ 0.09
Cbx3P23198 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cbx3P23198 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cbx3P23198 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cbx3P23198 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cbx3P23198 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Cbx3P23198 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cbx3P23198 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cbx3P23198 Gm43034-201ENSMUST00000198678 1364 ntBASIC15.63■□□□□ 0.09
Cbx3P23198 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cbx3P23198 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cbx3P23198 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cbx3P23198 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Cbx3P23198 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cbx3P23198 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Cbx3P23198 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cbx3P23198 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Cbx3P23198 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC15.63■□□□□ 0.09
Cbx3P23198 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC15.63■□□□□ 0.09
Cbx3P23198 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cbx3P23198 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cbx3P23198 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cbx3P23198 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cbx3P23198 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cbx3P23198 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.63■□□□□ 0.09
Cbx3P23198 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.63■□□□□ 0.09
Cbx3P23198 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cbx3P23198 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cbx3P23198 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.62■□□□□ 0.09
Cbx3P23198 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cbx3P23198 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cbx3P23198 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cbx3P23198 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.62■□□□□ 0.09
Cbx3P23198 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cbx3P23198 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cbx3P23198 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cbx3P23198 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cbx3P23198 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Cbx3P23198 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cbx3P23198 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cbx3P23198 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cbx3P23198 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms