Protein–RNA interactions for Protein: P22605

Rarb, Retinoic acid receptor beta, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RarbP22605 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RarbP22605 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RarbP22605 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RarbP22605 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RarbP22605 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
RarbP22605 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.97■□□□□ 0.63
RarbP22605 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.97■□□□□ 0.63
RarbP22605 Gm34391-201ENSMUST00000203706 907 ntBASIC18.97■□□□□ 0.63
RarbP22605 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RarbP22605 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RarbP22605 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RarbP22605 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RarbP22605 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
RarbP22605 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RarbP22605 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RarbP22605 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RarbP22605 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RarbP22605 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RarbP22605 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RarbP22605 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RarbP22605 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RarbP22605 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RarbP22605 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.96■□□□□ 0.63
RarbP22605 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RarbP22605 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.95■□□□□ 0.62
RarbP22605 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RarbP22605 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
RarbP22605 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RarbP22605 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RarbP22605 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RarbP22605 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RarbP22605 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RarbP22605 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RarbP22605 Gm28659-201ENSMUST00000188013 759 ntBASIC18.95■□□□□ 0.62
RarbP22605 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RarbP22605 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RarbP22605 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RarbP22605 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RarbP22605 Birc2-201ENSMUST00000054878 378 ntBASIC18.95■□□□□ 0.62
RarbP22605 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RarbP22605 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RarbP22605 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RarbP22605 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
RarbP22605 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RarbP22605 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RarbP22605 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RarbP22605 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RarbP22605 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RarbP22605 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.94■□□□□ 0.62
RarbP22605 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RarbP22605 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RarbP22605 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RarbP22605 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.94■□□□□ 0.62
RarbP22605 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.94■□□□□ 0.62
RarbP22605 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.94■□□□□ 0.62
RarbP22605 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RarbP22605 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RarbP22605 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RarbP22605 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.94■□□□□ 0.62
RarbP22605 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RarbP22605 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RarbP22605 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
RarbP22605 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RarbP22605 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
RarbP22605 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RarbP22605 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RarbP22605 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RarbP22605 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RarbP22605 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RarbP22605 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RarbP22605 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RarbP22605 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RarbP22605 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RarbP22605 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.93■□□□□ 0.62
RarbP22605 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RarbP22605 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RarbP22605 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RarbP22605 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RarbP22605 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RarbP22605 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RarbP22605 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RarbP22605 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RarbP22605 Rarb-207ENSMUST00000225921 2756 ntBASIC18.93■□□□□ 0.62
RarbP22605 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RarbP22605 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RarbP22605 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.92■□□□□ 0.62
RarbP22605 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RarbP22605 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RarbP22605 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RarbP22605 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RarbP22605 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RarbP22605 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.92■□□□□ 0.62
RarbP22605 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RarbP22605 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RarbP22605 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RarbP22605 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RarbP22605 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
RarbP22605 Gm43514-201ENSMUST00000198852 424 ntBASIC18.92■□□□□ 0.62
RarbP22605 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.92■□□□□ 0.62
RarbP22605 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms