Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx1P18111 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.85□□□□□ -0.19
Cdx1P18111 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx1P18111 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Cdx1P18111 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx1P18111 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC13.85□□□□□ -0.19
Cdx1P18111 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx1P18111 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx1P18111 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Cdx1P18111 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx1P18111 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx1P18111 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx1P18111 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx1P18111 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx1P18111 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx1P18111 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx1P18111 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.84□□□□□ -0.19
Cdx1P18111 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cdx1P18111 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx1P18111 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx1P18111 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Cdx1P18111 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx1P18111 Gm20760-201ENSMUST00000179197 648 ntBASIC13.84□□□□□ -0.19
Cdx1P18111 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx1P18111 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx1P18111 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx1P18111 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx1P18111 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx1P18111 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx1P18111 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC13.84□□□□□ -0.19
Cdx1P18111 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx1P18111 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx1P18111 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.84□□□□□ -0.19
Cdx1P18111 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx1P18111 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx1P18111 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cdx1P18111 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cdx1P18111 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.83□□□□□ -0.2
Cdx1P18111 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx1P18111 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx1P18111 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx1P18111 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx1P18111 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Cdx1P18111 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx1P18111 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx1P18111 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx1P18111 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx1P18111 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC13.83□□□□□ -0.2
Cdx1P18111 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx1P18111 CT010467.1-202ENSMUST00000205406 714 ntBASIC13.83□□□□□ -0.2
Cdx1P18111 AC154266.1-201ENSMUST00000223190 503 ntBASIC13.83□□□□□ -0.2
Cdx1P18111 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx1P18111 Gm6365-201ENSMUST00000054711 744 ntBASIC13.83□□□□□ -0.2
Cdx1P18111 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.83□□□□□ -0.2
Cdx1P18111 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx1P18111 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cdx1P18111 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx1P18111 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx1P18111 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx1P18111 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx1P18111 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx1P18111 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx1P18111 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cdx1P18111 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx1P18111 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cdx1P18111 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx1P18111 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Cdx1P18111 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC13.82□□□□□ -0.2
Cdx1P18111 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cdx1P18111 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx1P18111 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx1P18111 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Cdx1P18111 Gm13216-201ENSMUST00000117145 591 ntBASIC13.82□□□□□ -0.2
Cdx1P18111 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx1P18111 Gm38205-201ENSMUST00000192243 258 ntBASIC13.82□□□□□ -0.2
Cdx1P18111 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx1P18111 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx1P18111 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx1P18111 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx1P18111 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx1P18111 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx1P18111 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx1P18111 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx1P18111 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx1P18111 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cdx1P18111 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Cdx1P18111 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cdx1P18111 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdx1P18111 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdx1P18111 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdx1P18111 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdx1P18111 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdx1P18111 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cdx1P18111 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Cdx1P18111 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC13.81□□□□□ -0.2
Cdx1P18111 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.81□□□□□ -0.2
Cdx1P18111 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdx1P18111 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cdx1P18111 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cdx1P18111 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms