Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UbbP0CG49 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UbbP0CG49 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
UbbP0CG49 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
UbbP0CG49 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.95□□□□□ -0.02
UbbP0CG49 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
UbbP0CG49 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
UbbP0CG49 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UbbP0CG49 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UbbP0CG49 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
UbbP0CG49 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
UbbP0CG49 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UbbP0CG49 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UbbP0CG49 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UbbP0CG49 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UbbP0CG49 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UbbP0CG49 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.94□□□□□ -0.02
UbbP0CG49 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UbbP0CG49 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UbbP0CG49 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
UbbP0CG49 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UbbP0CG49 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UbbP0CG49 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UbbP0CG49 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UbbP0CG49 Gm5874-201ENSMUST00000096101 508 ntBASIC14.94□□□□□ -0.02
UbbP0CG49 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UbbP0CG49 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UbbP0CG49 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UbbP0CG49 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UbbP0CG49 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
UbbP0CG49 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UbbP0CG49 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UbbP0CG49 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
UbbP0CG49 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UbbP0CG49 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UbbP0CG49 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
UbbP0CG49 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
UbbP0CG49 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UbbP0CG49 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UbbP0CG49 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UbbP0CG49 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UbbP0CG49 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
UbbP0CG49 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
UbbP0CG49 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
UbbP0CG49 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UbbP0CG49 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
UbbP0CG49 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UbbP0CG49 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
UbbP0CG49 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UbbP0CG49 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UbbP0CG49 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
UbbP0CG49 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
UbbP0CG49 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
UbbP0CG49 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
UbbP0CG49 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UbbP0CG49 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
UbbP0CG49 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UbbP0CG49 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.92□□□□□ -0.02
UbbP0CG49 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UbbP0CG49 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
UbbP0CG49 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UbbP0CG49 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
UbbP0CG49 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UbbP0CG49 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
UbbP0CG49 Mir2861-201ENSMUST00000175539 82 ntBASIC14.92□□□□□ -0.02
UbbP0CG49 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
UbbP0CG49 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC14.92□□□□□ -0.02
UbbP0CG49 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC14.92□□□□□ -0.02
UbbP0CG49 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UbbP0CG49 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
UbbP0CG49 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UbbP0CG49 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
UbbP0CG49 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
UbbP0CG49 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UbbP0CG49 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UbbP0CG49 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UbbP0CG49 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
UbbP0CG49 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.92□□□□□ -0.02
UbbP0CG49 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.92□□□□□ -0.02
UbbP0CG49 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UbbP0CG49 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14.92□□□□□ -0.02
UbbP0CG49 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
UbbP0CG49 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UbbP0CG49 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
UbbP0CG49 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
UbbP0CG49 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
UbbP0CG49 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UbbP0CG49 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
UbbP0CG49 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.91□□□□□ -0.02
UbbP0CG49 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
UbbP0CG49 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UbbP0CG49 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UbbP0CG49 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
UbbP0CG49 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UbbP0CG49 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
UbbP0CG49 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
UbbP0CG49 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UbbP0CG49 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UbbP0CG49 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UbbP0CG49 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms