Protein–RNA interactions for Protein: P09925

Surf1, Surfeit locus protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Surf1P09925 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Surf1P09925 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Surf1P09925 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.37■□□□□ 0.69
Surf1P09925 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Surf1P09925 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Surf1P09925 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Surf1P09925 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Surf1P09925 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Surf1P09925 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Surf1P09925 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.36■□□□□ 0.69
Surf1P09925 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Surf1P09925 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Surf1P09925 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Surf1P09925 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.36■□□□□ 0.69
Surf1P09925 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.36■□□□□ 0.69
Surf1P09925 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Surf1P09925 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Surf1P09925 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Surf1P09925 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Surf1P09925 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Surf1P09925 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.36■□□□□ 0.69
Surf1P09925 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Surf1P09925 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Surf1P09925 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Surf1P09925 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.35■□□□□ 0.69
Surf1P09925 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Surf1P09925 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Surf1P09925 Idnk-204ENSMUST00000226010 1898 ntBASIC19.35■□□□□ 0.69
Surf1P09925 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Surf1P09925 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Surf1P09925 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Surf1P09925 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Surf1P09925 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Surf1P09925 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.35■□□□□ 0.69
Surf1P09925 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Surf1P09925 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Surf1P09925 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.35■□□□□ 0.69
Surf1P09925 Mir5122-201ENSMUST00000175004 89 ntBASIC19.35■□□□□ 0.69
Surf1P09925 Mir6982-201ENSMUST00000184354 68 ntBASIC19.35■□□□□ 0.69
Surf1P09925 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.35■□□□□ 0.69
Surf1P09925 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Surf1P09925 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Surf1P09925 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.35■□□□□ 0.69
Surf1P09925 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Surf1P09925 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Surf1P09925 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Surf1P09925 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.35■□□□□ 0.69
Surf1P09925 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Surf1P09925 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Surf1P09925 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Surf1P09925 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Surf1P09925 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Surf1P09925 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Surf1P09925 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.34■□□□□ 0.69
Surf1P09925 Gm10517-202ENSMUST00000192970 758 ntBASIC19.34■□□□□ 0.69
Surf1P09925 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.34■□□□□ 0.69
Surf1P09925 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.34■□□□□ 0.69
Surf1P09925 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Surf1P09925 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Surf1P09925 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Surf1P09925 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Surf1P09925 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Surf1P09925 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.34■□□□□ 0.69
Surf1P09925 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Surf1P09925 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Surf1P09925 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Surf1P09925 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.33■□□□□ 0.68
Surf1P09925 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.33■□□□□ 0.68
Surf1P09925 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Surf1P09925 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Surf1P09925 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Surf1P09925 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Surf1P09925 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Surf1P09925 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Surf1P09925 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Surf1P09925 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Surf1P09925 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Surf1P09925 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Surf1P09925 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.32■□□□□ 0.68
Surf1P09925 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Surf1P09925 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Surf1P09925 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Surf1P09925 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Surf1P09925 Gm37055-201ENSMUST00000191866 133 ntBASIC19.32■□□□□ 0.68
Surf1P09925 Gm4974-201ENSMUST00000209974 875 ntBASIC19.32■□□□□ 0.68
Surf1P09925 Timm23-208ENSMUST00000226683 750 ntBASIC19.32■□□□□ 0.68
Surf1P09925 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Surf1P09925 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Surf1P09925 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.32■□□□□ 0.68
Surf1P09925 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.32■□□□□ 0.68
Surf1P09925 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Surf1P09925 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Surf1P09925 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Surf1P09925 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Surf1P09925 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Surf1P09925 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Surf1P09925 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Surf1P09925 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Surf1P09925 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Surf1P09925 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms