Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06328 Dio3-201ENSMUST00000097228 1449 ntBASIC12.58□□□□□ -0.4
P06328 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06328 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06328 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
P06328 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
P06328 Gm45560-201ENSMUST00000211492 1472 ntBASIC12.58□□□□□ -0.4
P06328 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06328 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06328 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
P06328 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
P06328 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC12.57□□□□□ -0.4
P06328 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
P06328 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC12.57□□□□□ -0.4
P06328 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
P06328 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
P06328 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
P06328 Alkbh1-212ENSMUST00000185301 408 ntBASIC12.57□□□□□ -0.4
P06328 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
P06328 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P06328 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P06328 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
P06328 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
P06328 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P06328 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
P06328 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
P06328 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
P06328 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P06328 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06328 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06328 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06328 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
P06328 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06328 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06328 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
P06328 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC12.56□□□□□ -0.4
P06328 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06328 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
P06328 Haglr-201ENSMUST00000100000 2085 ntBASIC12.56□□□□□ -0.4
P06328 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06328 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
P06328 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06328 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06328 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06328 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06328 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06328 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.56□□□□□ -0.4
P06328 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P06328 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
P06328 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P06328 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P06328 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P06328 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
P06328 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC12.55□□□□□ -0.4
P06328 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P06328 Gm12896-201ENSMUST00000118430 226 ntBASIC12.55□□□□□ -0.4
P06328 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC12.55□□□□□ -0.4
P06328 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
P06328 AC163280.1-201ENSMUST00000228194 1100 ntBASIC12.55□□□□□ -0.4
P06328 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
P06328 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
P06328 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P06328 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
P06328 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
P06328 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
P06328 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
P06328 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P06328 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P06328 Gm21596-201ENSMUST00000178049 1316 ntBASIC12.55□□□□□ -0.4
P06328 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
P06328 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
P06328 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
P06328 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P06328 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
P06328 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
P06328 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
P06328 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P06328 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC12.54□□□□□ -0.4
P06328 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
P06328 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P06328 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P06328 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P06328 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P06328 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
P06328 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P06328 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P06328 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P06328 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P06328 Gm11620-201ENSMUST00000118770 1845 ntBASIC12.54□□□□□ -0.4
P06328 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P06328 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
P06328 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P06328 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P06328 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P06328 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
P06328 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC12.54□□□□□ -0.4
P06328 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
P06328 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC12.54□□□□□ -0.4
P06328 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P06328 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms