Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.33■□□□□ 0.37
PdgfrbP05622 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
PdgfrbP05622 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PdgfrbP05622 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
PdgfrbP05622 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PdgfrbP05622 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
PdgfrbP05622 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PdgfrbP05622 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PdgfrbP05622 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
PdgfrbP05622 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.33■□□□□ 0.36
PdgfrbP05622 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
PdgfrbP05622 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.33■□□□□ 0.36
PdgfrbP05622 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.33■□□□□ 0.36
PdgfrbP05622 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PdgfrbP05622 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PdgfrbP05622 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PdgfrbP05622 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PdgfrbP05622 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
PdgfrbP05622 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PdgfrbP05622 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PdgfrbP05622 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
PdgfrbP05622 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PdgfrbP05622 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PdgfrbP05622 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.33■□□□□ 0.36
PdgfrbP05622 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PdgfrbP05622 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PdgfrbP05622 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PdgfrbP05622 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PdgfrbP05622 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PdgfrbP05622 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PdgfrbP05622 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PdgfrbP05622 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.32■□□□□ 0.36
PdgfrbP05622 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PdgfrbP05622 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.32■□□□□ 0.36
PdgfrbP05622 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PdgfrbP05622 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PdgfrbP05622 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PdgfrbP05622 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PdgfrbP05622 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PdgfrbP05622 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PdgfrbP05622 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PdgfrbP05622 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PdgfrbP05622 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.32■□□□□ 0.36
PdgfrbP05622 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PdgfrbP05622 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PdgfrbP05622 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PdgfrbP05622 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.31■□□□□ 0.36
PdgfrbP05622 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PdgfrbP05622 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PdgfrbP05622 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PdgfrbP05622 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PdgfrbP05622 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PdgfrbP05622 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.31■□□□□ 0.36
PdgfrbP05622 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PdgfrbP05622 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PdgfrbP05622 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PdgfrbP05622 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PdgfrbP05622 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PdgfrbP05622 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PdgfrbP05622 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PdgfrbP05622 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PdgfrbP05622 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PdgfrbP05622 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PdgfrbP05622 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PdgfrbP05622 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PdgfrbP05622 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PdgfrbP05622 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PdgfrbP05622 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.3■□□□□ 0.36
PdgfrbP05622 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PdgfrbP05622 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
PdgfrbP05622 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.3■□□□□ 0.36
PdgfrbP05622 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PdgfrbP05622 Gm38027-201ENSMUST00000192315 235 ntBASIC17.3■□□□□ 0.36
PdgfrbP05622 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.3■□□□□ 0.36
PdgfrbP05622 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PdgfrbP05622 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PdgfrbP05622 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PdgfrbP05622 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PdgfrbP05622 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PdgfrbP05622 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PdgfrbP05622 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PdgfrbP05622 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PdgfrbP05622 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PdgfrbP05622 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PdgfrbP05622 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.29■□□□□ 0.36
PdgfrbP05622 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.29■□□□□ 0.36
PdgfrbP05622 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PdgfrbP05622 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PdgfrbP05622 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.29■□□□□ 0.36
PdgfrbP05622 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.29■□□□□ 0.36
PdgfrbP05622 Timm23-208ENSMUST00000226683 750 ntBASIC17.29■□□□□ 0.36
PdgfrbP05622 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.29■□□□□ 0.36
PdgfrbP05622 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PdgfrbP05622 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PdgfrbP05622 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PdgfrbP05622 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.29■□□□□ 0.36
PdgfrbP05622 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PdgfrbP05622 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PdgfrbP05622 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PdgfrbP05622 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms