Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa3P02831 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa3P02831 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa3P02831 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa3P02831 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.39□□□□□ -0.11
Hoxa3P02831 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.39□□□□□ -0.11
Hoxa3P02831 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa3P02831 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.39□□□□□ -0.11
Hoxa3P02831 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Hoxa3P02831 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa3P02831 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa3P02831 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa3P02831 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa3P02831 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa3P02831 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa3P02831 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Hoxa3P02831 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa3P02831 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa3P02831 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa3P02831 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Hoxa3P02831 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa3P02831 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa3P02831 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa3P02831 Gm10418-201ENSMUST00000100943 576 ntBASIC14.38□□□□□ -0.11
Hoxa3P02831 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa3P02831 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.38□□□□□ -0.11
Hoxa3P02831 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa3P02831 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa3P02831 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Hoxa3P02831 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa3P02831 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa3P02831 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa3P02831 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa3P02831 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa3P02831 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa3P02831 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.38□□□□□ -0.11
Hoxa3P02831 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Hoxa3P02831 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa3P02831 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa3P02831 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa3P02831 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Hoxa3P02831 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa3P02831 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa3P02831 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa3P02831 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa3P02831 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa3P02831 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Hoxa3P02831 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa3P02831 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa3P02831 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.37□□□□□ -0.11
Hoxa3P02831 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.37□□□□□ -0.11
Hoxa3P02831 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa3P02831 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa3P02831 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa3P02831 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa3P02831 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa3P02831 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa3P02831 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa3P02831 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.37□□□□□ -0.11
Hoxa3P02831 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa3P02831 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.37□□□□□ -0.11
Hoxa3P02831 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa3P02831 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa3P02831 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa3P02831 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa3P02831 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Hoxa3P02831 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa3P02831 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa3P02831 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa3P02831 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa3P02831 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Hoxa3P02831 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa3P02831 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa3P02831 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa3P02831 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.36□□□□□ -0.11
Hoxa3P02831 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa3P02831 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa3P02831 Gm24841-201ENSMUST00000158676 357 ntBASIC14.36□□□□□ -0.11
Hoxa3P02831 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa3P02831 Gm27463-201ENSMUST00000183569 57 ntBASIC14.36□□□□□ -0.11
Hoxa3P02831 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Hoxa3P02831 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Hoxa3P02831 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa3P02831 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa3P02831 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa3P02831 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa3P02831 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa3P02831 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa3P02831 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.36□□□□□ -0.11
Hoxa3P02831 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa3P02831 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.36□□□□□ -0.11
Hoxa3P02831 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Hoxa3P02831 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa3P02831 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa3P02831 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa3P02831 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa3P02831 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa3P02831 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.35□□□□□ -0.11
Hoxa3P02831 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.35□□□□□ -0.11
Hoxa3P02831 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms