Protein–RNA interactions for Protein: P01800

Ig heavy chain V-III region T957, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01800 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.05■□□□□ 0
P01800 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
P01800 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.05■□□□□ -0
P01800 Gm11927-201ENSMUST00000118472 759 ntBASIC15.05■□□□□ -0
P01800 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
P01800 Gm22240-201ENSMUST00000175225 82 ntBASIC15.05■□□□□ -0
P01800 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.05■□□□□ -0
P01800 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
P01800 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
P01800 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
P01800 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
P01800 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.05■□□□□ -0
P01800 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
P01800 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
P01800 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
P01800 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
P01800 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
P01800 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
P01800 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
P01800 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
P01800 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.04■□□□□ -0
P01800 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.04■□□□□ -0
P01800 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.04■□□□□ -0
P01800 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
P01800 Gm43859-201ENSMUST00000200075 1412 ntBASIC15.04■□□□□ -0
P01800 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.04■□□□□ -0
P01800 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.04■□□□□ -0
P01800 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.04■□□□□ -0
P01800 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
P01800 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
P01800 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
P01800 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
P01800 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
P01800 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
P01800 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.03■□□□□ -0
P01800 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
P01800 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
P01800 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.03■□□□□ -0
P01800 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
P01800 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
P01800 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
P01800 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
P01800 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.03■□□□□ -0
P01800 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.03■□□□□ -0
P01800 Rab3c-203ENSMUST00000224180 967 ntBASIC15.03■□□□□ -0
P01800 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.03■□□□□ -0
P01800 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
P01800 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
P01800 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.03■□□□□ -0
P01800 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
P01800 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
P01800 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.02■□□□□ -0
P01800 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
P01800 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
P01800 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
P01800 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
P01800 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
P01800 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
P01800 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC15.02■□□□□ -0
P01800 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
P01800 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.02■□□□□ -0
P01800 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
P01800 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
P01800 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
P01800 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
P01800 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
P01800 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
P01800 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
P01800 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
P01800 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
P01800 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
P01800 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
P01800 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
P01800 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
P01800 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
P01800 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
P01800 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
P01800 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
P01800 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.01□□□□□ -0.01
P01800 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
P01800 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
P01800 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.01□□□□□ -0.01
P01800 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.01□□□□□ -0.01
P01800 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
P01800 Gm20049-201ENSMUST00000219950 730 ntBASIC15.01□□□□□ -0.01
P01800 Mtag2-201ENSMUST00000058665 714 ntBASIC15.01□□□□□ -0.01
P01800 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
P01800 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
P01800 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
P01800 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
P01800 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
P01800 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
P01800 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
P01800 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
P01800 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
P01800 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15□□□□□ -0.01
P01800 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
P01800 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
P01800 Gm12527-201ENSMUST00000117967 564 ntBASIC15□□□□□ -0.01
P01800 Gm11643-201ENSMUST00000119578 864 ntBASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms