Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Igh-VJ558P01758 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Igh-VJ558P01758 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Igh-VJ558P01758 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Igh-VJ558P01758 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Igh-VJ558P01758 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Igh-VJ558P01758 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Igh-VJ558P01758 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Igh-VJ558P01758 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Igh-VJ558P01758 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Igh-VJ558P01758 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Igh-VJ558P01758 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Igh-VJ558P01758 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.82□□□□□ -0.04
Igh-VJ558P01758 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Igh-VJ558P01758 Gm27011-201ENSMUST00000182352 972 ntBASIC14.82□□□□□ -0.04
Igh-VJ558P01758 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Igh-VJ558P01758 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.82□□□□□ -0.04
Igh-VJ558P01758 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Igh-VJ558P01758 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Igh-VJ558P01758 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Igh-VJ558P01758 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Igh-VJ558P01758 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Igh-VJ558P01758 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Igh-VJ558P01758 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Igh-VJ558P01758 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Igh-VJ558P01758 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Igh-VJ558P01758 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Igh-VJ558P01758 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Igh-VJ558P01758 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Igh-VJ558P01758 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Igh-VJ558P01758 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Igh-VJ558P01758 Gm13216-201ENSMUST00000117145 591 ntBASIC14.81□□□□□ -0.04
Igh-VJ558P01758 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.81□□□□□ -0.04
Igh-VJ558P01758 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Igh-VJ558P01758 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.81□□□□□ -0.04
Igh-VJ558P01758 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Igh-VJ558P01758 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.81□□□□□ -0.04
Igh-VJ558P01758 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.81□□□□□ -0.04
Igh-VJ558P01758 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Igh-VJ558P01758 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Igh-VJ558P01758 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Igh-VJ558P01758 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Igh-VJ558P01758 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Igh-VJ558P01758 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Igh-VJ558P01758 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Igh-VJ558P01758 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Igh-VJ558P01758 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Igh-VJ558P01758 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Igh-VJ558P01758 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Igh-VJ558P01758 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.8□□□□□ -0.04
Igh-VJ558P01758 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Igh-VJ558P01758 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14.8□□□□□ -0.04
Igh-VJ558P01758 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Igh-VJ558P01758 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.8□□□□□ -0.04
Igh-VJ558P01758 Gm715-201ENSMUST00000117865 831 ntBASIC14.8□□□□□ -0.04
Igh-VJ558P01758 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.8□□□□□ -0.04
Igh-VJ558P01758 Il3ra-202ENSMUST00000223589 738 ntBASIC14.8□□□□□ -0.04
Igh-VJ558P01758 Timm23-208ENSMUST00000226683 750 ntBASIC14.8□□□□□ -0.04
Igh-VJ558P01758 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Igh-VJ558P01758 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Igh-VJ558P01758 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Igh-VJ558P01758 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Igh-VJ558P01758 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Igh-VJ558P01758 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Igh-VJ558P01758 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Igh-VJ558P01758 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Igh-VJ558P01758 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Igh-VJ558P01758 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Igh-VJ558P01758 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Igh-VJ558P01758 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.8□□□□□ -0.04
Igh-VJ558P01758 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Igh-VJ558P01758 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Igh-VJ558P01758 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Igh-VJ558P01758 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.8□□□□□ -0.04
Igh-VJ558P01758 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Igh-VJ558P01758 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.8□□□□□ -0.04
Igh-VJ558P01758 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Igh-VJ558P01758 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Igh-VJ558P01758 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC14.79□□□□□ -0.04
Igh-VJ558P01758 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.79□□□□□ -0.04
Igh-VJ558P01758 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Igh-VJ558P01758 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.79□□□□□ -0.04
Igh-VJ558P01758 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Igh-VJ558P01758 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Igh-VJ558P01758 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Igh-VJ558P01758 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Igh-VJ558P01758 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Igh-VJ558P01758 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Igh-VJ558P01758 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Igh-VJ558P01758 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Igh-VJ558P01758 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Igh-VJ558P01758 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Igh-VJ558P01758 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Igh-VJ558P01758 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Igh-VJ558P01758 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Igh-VJ558P01758 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
Igh-VJ558P01758 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Igh-VJ558P01758 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Igh-VJ558P01758 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Igh-VJ558P01758 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms