Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ShdO88834 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ShdO88834 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ShdO88834 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ShdO88834 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ShdO88834 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
ShdO88834 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.52■□□□□ 0.4
ShdO88834 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ShdO88834 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
ShdO88834 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
ShdO88834 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.52■□□□□ 0.4
ShdO88834 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.52■□□□□ 0.4
ShdO88834 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ShdO88834 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.52■□□□□ 0.4
ShdO88834 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ShdO88834 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ShdO88834 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ShdO88834 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.52■□□□□ 0.39
ShdO88834 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
ShdO88834 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ShdO88834 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ShdO88834 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ShdO88834 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ShdO88834 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ShdO88834 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
ShdO88834 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ShdO88834 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
ShdO88834 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ShdO88834 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
ShdO88834 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
ShdO88834 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.51■□□□□ 0.39
ShdO88834 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ShdO88834 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.51■□□□□ 0.39
ShdO88834 Gm38027-201ENSMUST00000192315 235 ntBASIC17.51■□□□□ 0.39
ShdO88834 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.51■□□□□ 0.39
ShdO88834 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ShdO88834 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ShdO88834 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ShdO88834 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
ShdO88834 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ShdO88834 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.51■□□□□ 0.39
ShdO88834 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.51■□□□□ 0.39
ShdO88834 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ShdO88834 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
ShdO88834 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
ShdO88834 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ShdO88834 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ShdO88834 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ShdO88834 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
ShdO88834 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
ShdO88834 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ShdO88834 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ShdO88834 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
ShdO88834 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
ShdO88834 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ShdO88834 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ShdO88834 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.5■□□□□ 0.39
ShdO88834 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
ShdO88834 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.5■□□□□ 0.39
ShdO88834 Mir5122-201ENSMUST00000175004 89 ntBASIC17.5■□□□□ 0.39
ShdO88834 Mir6982-201ENSMUST00000184354 68 ntBASIC17.5■□□□□ 0.39
ShdO88834 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.5■□□□□ 0.39
ShdO88834 Timm23-208ENSMUST00000226683 750 ntBASIC17.5■□□□□ 0.39
ShdO88834 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.5■□□□□ 0.39
ShdO88834 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ShdO88834 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ShdO88834 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
ShdO88834 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ShdO88834 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ShdO88834 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ShdO88834 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ShdO88834 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ShdO88834 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ShdO88834 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ShdO88834 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
ShdO88834 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
ShdO88834 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ShdO88834 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ShdO88834 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ShdO88834 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ShdO88834 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ShdO88834 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ShdO88834 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ShdO88834 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ShdO88834 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ShdO88834 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
ShdO88834 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
ShdO88834 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ShdO88834 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.49■□□□□ 0.39
ShdO88834 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ShdO88834 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ShdO88834 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ShdO88834 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ShdO88834 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ShdO88834 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
ShdO88834 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ShdO88834 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ShdO88834 Gm7638-201ENSMUST00000121348 967 ntBASIC17.48■□□□□ 0.39
ShdO88834 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ShdO88834 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms